Gordonia rubripertincta: GCWB2_10045
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Entry
GCWB2_10045 CDS
T05629
Symbol
frdB
Name
(GenBank) Fumarate reductase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00020
Citrate cycle (TCA cycle)
gru00190
Oxidative phosphorylation
gru00650
Butanoate metabolism
gru00720
Other carbon fixation pathways
gru01100
Metabolic pathways
gru01110
Biosynthesis of secondary metabolites
gru01120
Microbial metabolism in diverse environments
gru01200
Carbon metabolism
Module
gru_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gru_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gru_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GCWB2_10045 (frdB)
00650 Butanoate metabolism
GCWB2_10045 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
GCWB2_10045 (frdB)
00720 Other carbon fixation pathways
GCWB2_10045 (frdB)
Enzymes [BR:
gru01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GCWB2_10045 (frdB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_7
Fer2
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ASR02811
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All DBs
Position
2184916..2185662
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AA seq
248 aa
AA seq
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MGYDAKFRVWRGDTEGGGLEDYTVLANDGEVVLDIIHRLQATQAPDLAVRWNCKAGKCGS
CSAEVNGRPKLLCMTRMSTFTEDEVITVTPMRTFPVIRDLVTDVSFNYQKAREIQSFTPP
PDLGPGEYRMKQVDVQRSQEFRKCIECFLCQNTCHVVRDHEENKEAFAGPRYLMRIAELD
MHPLDTAERRDTAQNEHGLGFCNITKCCSDVCPEDIKITDNALIPMKERVVDQKYDPLVW
LGNKLFRR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgggatacgacgcgaagttccgagtatggcgcggtgacaccgaaggcggtgggctcgag
gactacacggtcctcgccaacgacggcgaggtggtgctcgacatcatccaccgcctccag
gcaacccaggcccccgacctcgccgtccgctggaactgcaaggcgggcaagtgcggatcg
tgttcggcagaggtcaacggccgtcccaagctgctctgtatgacccggatgtcgacgttc
accgaggacgaggtcatcacggtgaccccgatgcgcaccttcccggtgatccgcgacctc
gtcaccgacgtctcgttcaactatcagaaagcccgcgagatccagtcgttcaccccgccg
cccgatctggggccgggggagtaccgcatgaagcaggtcgacgtgcagcgctcgcaggaa
ttccgtaagtgcatcgagtgcttcctctgccaaaacacctgccacgtggtccgcgaccac
gaggaaaacaaggaggccttcgccggcccccgctacctcatgcggatcgccgagctcgac
atgcacccgctcgacacggctgagcggcgggatacggcccagaacgagcacggcctgggg
ttctgcaacatcaccaagtgctgctccgatgtctgtcccgaggacatcaagatcaccgac
aacgcgctgatcccgatgaaagaacgggttgtggatcagaagtacgacccgctggtgtgg
ctggggaacaagctcttccgacgctag
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