Gordonia rubripertincta: GCWB2_10105
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Entry
GCWB2_10105 CDS
T05629
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gru
Gordonia rubripertincta
Pathway
gru03030
DNA replication
gru03410
Base excision repair
gru03420
Nucleotide excision repair
gru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCWB2_10105 (polA)
03410 Base excision repair
GCWB2_10105 (polA)
03420 Nucleotide excision repair
GCWB2_10105 (polA)
03440 Homologous recombination
GCWB2_10105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gru03032
]
GCWB2_10105 (polA)
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_10105 (polA)
Enzymes [BR:
gru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCWB2_10105 (polA)
DNA replication proteins [BR:
gru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GCWB2_10105 (polA)
DNA repair and recombination proteins [BR:
gru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GCWB2_10105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCWB2_10105 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
Hydrolase
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASR02822
LinkDB
All DBs
Position
2197226..2199901
Genome browser
AA seq
891 aa
AA seq
DB search
MLLDGHSLAYRAFFALPAENFKTATGQTTNAVYGFTSMLINLLRDEEPTHIAAAFDVSRK
TFRSEMFPEYKAQRSKSPDEFNGQVDLTKEVLDALGVTVMAIEGFEADDIIATLATQARE
QGFKVLIVTGDRDSLQLVDPSTTVLYPRKGVSDLTRFTPEEVEKKYGLTPAQYPDYAALR
GDPSDNLPGIPGVGEKTASKWIREYGSLASLVDHVDEVKGKVGDALRANLASVQTNRQLT
ELIRDMQLPAGPEDLAMVGWDRDRIHQLFDDLEFRVLRDRLFSTLSSVEPEAEAGFDLDG
SVLGAGEVAGWLNEHARTGRTGLAVTAPHVVVGSDPTGLAIAAADGSSAYVDVTALTPED
DAALANWLADPQALKAVHEAKWAVHALRSRGWKLDGVTSDTSLAAYLVRPGQRTFNLDDL
ALRYLRRELRADTGAGDGQMSLLDDDTEGKVAEQHMLEARAVQELADTLDTELDRIDSKP
LLTEMELPLSFVLADLEAAGIAVDVDHFNALAQMFNDRIRAAAESAYEVIGEQINLGSPK
QLQTVLFDKLDMPKTKKTKTGYTTDADALQSLYEKTEHPFLAHLLEHRDATRLKVTVDGL
LKSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIPVRTEAGREIRRGFIVGTDQASGVNY
DCLMTADYSQIEMRIMAHLSEDEGLIEAFNTGEDLHNFVGSRAFGVPIDEVTTEMRHRVK
AMSYGLAYGLSAFGLAAQLKISRDEAKDQMEAYFARFGGVRDYLHDVVAEARRNEYTATL
FGRRRYLPDLNSDNWQRRQSAERMALNAPIQGTAADIIKVAMINVHKRFLAERLTSRVLL
QVHDELVVEVAAGERDAVEAAVREEMGNAITLSVPLEVSVGFGRSWDDAAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcgacgggcattccctggcataccgggcgttcttcgcgcttccggccgagaac
ttcaagacggccaccgggcagaccaccaacgcggtgtacggattcacctcgatgctcatc
aacctgctgcgcgacgaggaacccacgcacatcgcggccgccttcgacgtctcgcggaag
acgttccggtcggagatgttcccggagtacaaggcgcagcgctccaagtcgcccgacgag
ttcaacggacaggtcgacctcaccaaggaggtactcgacgcgctgggtgtcacggtcatg
gcgatcgaggggttcgaggccgacgacatcatcgcgactctcgcgacccaggcgcgcgaa
cagggcttcaaggtcttgatcgtcacgggcgaccgtgactcgctgcagctggtcgacccg
tcgaccaccgtgctctacccccgcaagggcgtctcggacctcacacgcttcacccccgaa
gaggtggagaagaagtacggtcttacccccgctcagtaccccgactacgccgccctgcgc
ggcgaccccagcgacaacctgcccggcatcccgggtgtgggggagaagaccgcgtcgaag
tggattcgcgagtacgggtcgctggcctcgctcgtcgatcacgtcgacgaggtgaagggc
aaggtcggcgacgcgctgcgcgcgaatctggcctcggtgcagaccaaccgtcagctcacc
gagctcatccgcgacatgcagctccccgcaggccccgaagacctcgcgatggtcggctgg
gatcgcgatcgcatccaccagctctttgacgacctcgagttccgcgtcctgcgcgaccgc
ctgttctcgaccctgagctccgtcgagccggaggccgaggcgggattcgatctcgacggc
tcggtcctcggcgccggcgaggtcgcgggatggctgaacgaacacgcccggaccggccgg
accggtctcgcggtgaccgcgccgcacgtcgtcgtggggtccgacccgaccggactggcg
atcgcggccgccgacggctcgtcggcctatgtcgacgtgaccgcgctgacgccggaagac
gatgcggcgctggccaactggctcgccgacccgcaggcgctcaaggccgtgcacgaggcc
aagtgggcggtacacgcgctgcgttcgcgcgggtggaagctcgacggtgtcaccagcgac
acctcgctggccgcgtacctcgtccgccccgggcagcggaccttcaacctcgacgacctc
gccctgcggtacctgcgccgtgagctgcgcgccgacaccggtgcgggcgacggccagatg
tcgctgctcgacgacgacaccgagggcaaggtcgccgaacagcacatgctcgaggcgcgc
gcggtgcaggaactcgccgacaccctcgacaccgaactcgaccgcatcgactccaagccg
ctgctcaccgagatggaactgccgctgtcgttcgtgcttgccgacctcgaggccgccggc
atcgccgtcgacgtcgaccacttcaacgcactcgcgcagatgttcaacgaccggatccgc
gcggccgccgagtccgcctacgaggtcatcggcgaacagatcaacctcggctcgcccaag
cagctgcagaccgtgctcttcgacaagctcgacatgccgaagaccaagaagaccaagacc
ggttacacgaccgacgccgacgcgctgcagtcgttgtatgagaagaccgaacatcctttc
ctcgcacaccttctcgagcatcgcgacgcgacgcggctgaaggtgaccgtcgacgggctg
ctgaagtcggtggccgacgacggtcgcatccacacgaccttcaaccagaccatcgccgcg
accggccgcctgtcgtcgaccgaaccgaacctgcagaacatcccggtccgcaccgaggcc
ggacgcgagatccgacgcggcttcatcgtggggacggatcaggcgtcgggagtgaactac
gactgcctgatgaccgccgactacagccagatcgagatgcggatcatggcgcacctgtcg
gaggacgaagggttgatcgaggccttcaacaccggcgaggacctgcacaacttcgtcgga
tcgcgtgccttcggggtgccgatcgacgaggtgaccaccgagatgcgccaccgtgtgaag
gcgatgtcgtacggactcgcctacggcctcagcgctttcgggctcgcggcccagctgaag
atcagccgcgacgaggccaaggaccagatggaggcgtacttcgcgcgattcggtggtgtg
cgtgactatctgcacgacgtggtcgccgaagcccggcgcaacgagtacaccgcgacgctg
ttcggccgacggcgttacctgcccgatctgaacagcgacaactggcaacgacgccagtcc
gcggagcggatggcgctcaacgcacccatccagggcaccgccgccgacatcatcaaggtc
gcgatgatcaacgtgcacaagcgtttcctcgccgagagactgacgtcgcgggtgttgctg
caggtccacgacgaactcgtggtggaggtggccgccggcgagcgcgacgcggtcgaggcc
gcggtgcgcgaggagatgggtaacgccatcacgctgtcggtcccgctcgaggtgtcggtc
gggttcggtcggtcctgggacgacgcggcccactga
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