Gordonia rubripertincta: GCWB2_13010
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Entry
GCWB2_13010 CDS
T05629
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
gru
Gordonia rubripertincta
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gru03051
]
GCWB2_13010 (pafA)
Enzymes [BR:
gru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
GCWB2_13010 (pafA)
Proteasome [BR:
gru03051
]
Prokaryotic proteasome
Bacterial regulatory particles
GCWB2_13010 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
ASR03399
UniProt:
A0AAW6RBE4
LinkDB
All DBs
Position
complement(2859372..2860730)
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGS
HPEYATAECDSLIQLINHDRAGELVLEDLLVDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSEMTTLLKVGSAALVLEMIEAGVAF
RDFALDNPIRAIREVSHDPTGRRPVRLAGGRQASALDIQREYHARAVEHLTNRRPDPEMD
MVVDLWGRMLDAVEADDFAKVDTEIDWVIKRKLFQRYQDKYSMELSDPKIAQLDLAFHDI
KRGRGVFDVLMRKGLVARATTDEAIKTAVNEPPQTTRAKLRGDFISAAQKAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggcatcgagaccgaattcggtgtcacgtgcaccttccacggc
caccgacgactgagcccggacgaggtggcgcggtatctcttccgccgtgtcgtgtcctgg
ggccgctcctcgaacgtcttcctgcagaacggcgcacggctctatctcgacgtcggctcg
catcccgagtacgcgacggccgagtgcgacagcctcatccagctgatcaaccacgaccgc
gccggcgaactcgtcctcgaggacctgctcgtcgacgccgaacagcgtctcgccgacgag
ggcatcggcggcgacatctacctgttcaagaacaacaccgactccgcgggcaactcctac
ggctgccacgagaactatctcgtcgtccgggcgggggagttctcccggatctccgacgtc
ctgctgccgttcctggtgacccggcagctgatctgcggtgccggcaaggtgctgcagacg
ccgaaggccgccaccttctgcctgtcgcagcgcgcggagcacatctgggagggtgtctcc
tcggcgaccacccggtcgcggccgatcatcaacacgcgtgacgagccgcatgccgacgcc
gagaagtaccgtcgcctgcacgtcatcgtcggcgactccaacatgtccgagatgacgacc
ctgctgaaggtcggctcggccgccctggtgctcgagatgatcgaggccggcgtggcgttc
cgggacttcgctctcgacaaccccatccgcgccatccgcgaggtcagccacgatcccacc
ggccgacgcccggtgcgtctcgccggcggccgccaggccagcgctctcgacatccagcgc
gagtaccacgcacgcgcggtcgagcacctcacaaaccgtcgtcccgatcccgagatggac
atggtcgtcgacctgtggggccgcatgctcgacgcggtcgaggccgacgacttcgccaag
gtcgacaccgagatcgactgggtcatcaagcgcaagctgttccagcgctaccaggacaag
tactcgatggagctgtcggacccgaagatcgcgcagctcgacctcgccttccacgacatc
aagcgcggacgcggtgtgttcgacgtcctgatgcgcaaggggctggtggcccgcgcgacc
accgatgaggccatcaagaccgccgtcaacgagccgccgcagaccacccgggccaagctc
cggggtgacttcatctcggcggcgcagaaggccggacgcgacttcaccgtcgactgggtc
cacctcaagctgaacgaccaggcccagcgcaccgtgctgtgcaaggacccgttccgcagc
gtcgacgagcgggtcgaccggctgatcgcgtccatgtga
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