Gordonia rubripertincta: GCWB2_13845
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Entry
GCWB2_13845 CDS
T05629
Symbol
pdxS
Name
(GenBank) Pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00750
Vitamin B6 metabolism
gru01100
Metabolic pathways
gru01240
Biosynthesis of cofactors
Module
gru_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GCWB2_13845 (pdxS)
Enzymes [BR:
gru01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GCWB2_13845 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
Glu_synthase
FMN_dh
DHO_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
ASR03565
UniProt:
A0AAW4G691
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All DBs
Position
complement(3040749..3041660)
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AA seq
303 aa
AA seq
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MSQNGATVPEVGQGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPAD
IRAQGGVSRMSDPDMIDGIISAVSIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPAD
YSNHIDKWAFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIRDEI
RRLTSLPKDELYVAAKELQAPYDLVVEVAEAGKLPVTLFTAGGIATPADAAMMMQLGAEG
VFVGSGIFKSGNPAQRAAAIVQATTFHDDPDVLAKVSRGLGEAMVGINVDDIPQPHRLAE
RGW
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcagaacggcgcgaccgttcccgaggtcggacagggcactgcccgggtcaagcgg
ggaatggccgaaatgctcaagggcggcgtgatcatggacgtggtcacccccgagcaggcg
aagatcgccgaggacgccggcgcggtggccgtgatggctctcgagcgtgtgcccgccgac
atccgcgcccagggcggcgtctcgcggatgagcgatccggacatgatcgacggcatcatc
tccgccgtctcgatcccggtcatggccaaggcacgtatcggccacttcgtcgaggcgcag
atcctgcagagcctgggcgtggactacgtcgacgagtccgaggtcctcaccccggccgac
tactccaaccacatcgacaagtgggcgttcaccgtgccgttcgtgtgcggtgcgaccaac
ctgggtgaggcgctgcgccggatcaccgagggtgcggcgatgatccgctcgaagggcgag
gccggcaccggtgacgtgtccaacgccaccacccacatgcgcaagatccgcgacgagatc
cgacgcctgacctcgctgcccaaggacgagttgtacgtggcggcaaaggaactgcaggcc
ccctacgacctggtggtcgaggtcgccgaggcgggcaagctgccggtcacgctgttcacc
gccggcggcatcgccaccccggcggacgcggcgatgatgatgcagctcggcgccgagggc
gtcttcgtgggctcggggatcttcaagtccggcaacccggcacagcgtgcggccgccatc
gtgcaggccaccaccttccacgacgaccccgacgtcctggccaaggtctcgcgcggactg
ggcgaggcgatggtcggcatcaacgtcgacgacatcccgcagccgcaccgcctggccgag
cgcggctggtga
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