Gordonia rubripertincta: GCWB2_14920
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Entry
GCWB2_14920 CDS
T05629
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gru
Gordonia rubripertincta
Pathway
gru02024
Quorum sensing
gru03060
Protein export
gru03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GCWB2_14920 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GCWB2_14920 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCWB2_14920 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gru02044
]
GCWB2_14920 (ffh)
Enzymes [BR:
gru01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
GCWB2_14920 (ffh)
Secretion system [BR:
gru02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GCWB2_14920 (ffh)
Eukaryotic Sec-SRP protein
GCWB2_14920 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
AAA_22
MeaB
CbiA
AAA_24
APS_kinase
AAA_31
nSTAND3
Zeta_toxin
TctA
ArsA_ATPase
CLP1_P
NPHP3_N
AAA_18
AAA_16
AAA_33
Thymidylate_kin
TsaE
MobB
6PF2K
AAA_30
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
ASR03775
UniProt:
A0AAW6R3W0
LinkDB
All DBs
Position
complement(3261015..3262574)
Genome browser
AA seq
519 aa
AA seq
DB search
MFDSLSDRLTGALKDLRGKGRLSDADIDRTCREIRLALLEADVSLPVVRAFIARIKERAK
GAEVSAALNPAQTVVKIVNEELIGILGGETRRVRFAKNPPTVIMLAGLQGAGKTTLAGKL
GNWLKQQGHTPLLVACDLQRPGAVSQLQIVGERAGVPVFAPHPGTSVGGEGTLGVTSGDP
VSVARAGVEEAKAKHYDVVVIDTAGRLGIDSELMKQASDIRDATTPDEVLFVVDAMIGQD
AVSTAEAFADGVGFTGVVLTKLDGDARGGAALSVREVTGQPIMFASSGEKLEDFDVFHPD
RMASRILGMGDVLSLIEQAEQHWDAEQAEAAAAKITQGELTLEDFLEQMLMIRKMGPIGN
ILGMLPGAGQMKDALSQVDDKQLDRVQAIIRGMTPAERDNPKIINASRRLRIANGSGVTV
SEVNQLVDRFFEARKMMAQMSGRMGMGGMNRKSNRKGKKGKKGKGRGPTPPKVRGGFPGM
PGGMPAGFPDLSNMPAGLDQLPPGLEGIDVSQFQPKKKK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattccctctccgaccggttgaccggtgccctgaaggacctccgcggcaagggg
cggctctccgacgccgacatcgaccgcacctgccgcgagatccggctcgccctgctcgag
gccgacgtctcgctgccggtggtgcgcgccttcatcgcgcggatcaaggaacgggcgaag
ggcgcggaggtctccgcggcgctgaacccggcccagacggtcgtcaagatcgtcaacgag
gaactcatcggaatcctcggcggcgagacccgccgggtgcggttcgcgaagaacccgccc
acggtcatcatgctggccggtctccagggcgccggtaagacgactctcgccggcaagctc
ggcaactggctcaagcagcagggacacacgccgctgctcgtggcctgtgacctccagcgt
ccgggcgcggtctcccagctgcagatcgtcggcgagcgggccggcgtgccggtcttcgcg
ccgcacccgggcaccagcgtcggcggcgaaggaacactcggtgtcacctccggcgacccg
gtctcggtcgcccgcgccggtgtcgaggaggcgaaggccaagcactacgacgtcgtcgtc
atcgacaccgccggccgcctgggtatcgactccgagctgatgaagcaggcctccgacatc
cgcgacgcgaccacgcccgacgaggtgctgttcgtcgtcgacgcgatgatcggtcaggac
gcggtctcgaccgccgaggccttcgccgacggtgtgggcttcaccggcgtcgtactgacc
aagctcgacggtgacgcccgcggcggtgccgctctgtcggtgcgcgaggtcaccggtcag
ccgatcatgttcgcgtcctccggtgagaagctcgaggacttcgacgtcttccaccccgac
cgcatggccagccgcatcctcggtatgggcgacgtgctcagcctcatcgagcaggccgag
cagcactgggatgccgagcaggccgaggccgccgcggccaagatcacgcagggcgagctg
acgctcgaggatttcctcgagcagatgctgatgatccgcaagatgggtcccatcggcaac
atcctgggcatgctccccggcgccggccagatgaaggacgcgctgtcgcaggtcgacgac
aagcagctcgaccgggtccaggcgatcatccgcggtatgacgcccgccgagcgggacaat
ccgaagatcatcaacgcctcacgccgcctgcgtatcgccaacgggtccggcgtgaccgtc
agcgaggtcaaccagctcgtcgaccgcttcttcgaggcccgcaagatgatggcccagatg
tcgggtcgcatgggcatgggcgggatgaaccggaagtccaaccgcaagggcaagaagggg
aagaaggggaagggacgcggtcccacgccgccgaaggtgcgcggcggcttcccggggatg
ccgggaggcatgcccgccggcttcccggatctgtccaacatgcccgccggactcgaccag
ctgccgccgggtctcgagggcatcgacgtctcccagttccagcccaagaagaagaagtag
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