Gordonia rubripertincta: GCWB2_15335
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Entry
GCWB2_15335 CDS
T05629
Name
(GenBank) AAA-like domain protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
gru
Gordonia rubripertincta
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_15335
DNA repair and recombination proteins [BR:
gru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GCWB2_15335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
ResIII
AAA_16
FtsK_SpoIIIE
AAA_30
CbiA
T2SSE
Zeta_toxin
AAA_6
AAA
AAA_19
AAA_7
SRP54
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ASR03855
LinkDB
All DBs
Position
complement(3352535..3354121)
Genome browser
AA seq
528 aa
AA seq
DB search
MSLVTEALSPAQTIAAGYAFASTSLELGTVSVDGQVDATASVRIPLAMMNRHGLVAGATG
TGKTKTLQLLAEQLSANGVPVVMADIKGDLSGLSREGVGNDKIVARAQQTGDSWQPAAHP
VEFVSLGDTGIGVPIRATITSFGPILLSKVLGLNDTQESTLGLIFHWADKKGLPLLDLKD
LRSVIAFLTGDEGKEELKNIGGVSRQTAGVILRALTNLEADGGDTFFGEPEIEPADLIRL
AADGRGIITLFELGAQAARPALFSTFLMWILADLFEFLPEVGDLDKPKLVFIFDESHLLF
DDASKAFIDQVVQTVKLIRSKGVGVFFCSQLPTDIPNEVLSQLGARIQHALRAFTPDDQK
ALKKTVKTYPVSEVYKLEQVLTSLGTGEAVVTVLSEKGAPTPVAWTVVRPPRSSMDAIGA
EAITAAAQASPLYAKYGQSIDRESAYEMLAANTLAPGEPADAPAPAPIPAPAPAPMPAPA
PKPVPEEPGIITEVLTSKPMQSFLRSAASAAGREFSRAIFGTGRRRKR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctcgtgaccgaagccctcagccctgctcagaccatcgccgccggctacgccttc
gcctcgacctctctcgaactggggacggtgtcggtggacggtcaggtcgacgccaccgcg
tcggtgcgcatcccgctcgcgatgatgaaccggcacggcctcgttgccggcgccacgggt
accggcaagaccaagacgctgcagttgctggccgagcagctctccgccaacggtgtgccc
gtggtgatggccgacatcaagggggacctctccgggctgagccgcgagggcgtcggcaac
gacaagatcgtcgcgcgcgcacagcagaccggcgactcctggcagcccgccgctcacccc
gtcgagttcgtctcgctcggtgacaccggcatcggcgtgcccatccgggcgacgatcacg
tctttcggcccgatcctgttgtccaaagtgttgggactcaacgacacccaggaatccact
ctcggactcatcttccactgggcggacaagaagggcctgccgctgctcgacctcaaggac
ctgcggtcggtgatcgccttcctcaccggtgacgagggcaaggaagagctcaagaacatc
ggcggggtctcgcgtcagaccgcgggtgtgatcctgcgcgccctgaccaatctcgaggcc
gacggcggcgacacgttcttcggtgagcccgagatcgaacccgccgacctcatccgcctc
gccgccgacggtcgcggcatcatcacgctcttcgaactcggcgcacaggccgcccggccc
gccctgttctccaccttcctgatgtggatcctggccgacctcttcgagttcctgcccgag
gtcggcgacctcgacaagccgaagctggtcttcatcttcgacgagtcgcacctgctgttc
gacgacgcgtcgaaggcgttcatcgaccaggtcgtgcagacggtcaagctgatccgctcg
aagggcgtgggtgtgttcttctgctcgcagctgcccaccgacatccccaacgaagtgctg
tcgcagctcggcgcccgcatccagcatgcgttgcgcgccttcacccccgacgatcagaag
gcactgaagaagacggtcaagacctacccggtctcggaggtctacaagctcgagcaggtc
ctcacctcgctgggtaccggcgaggccgtggtgacggtgctgtcggagaagggtgcaccg
actcccgtcgcgtggacggttgtgcgtccgccgcgttcgtcgatggatgccatcggcgcg
gaggcgatcaccgccgccgcccaggccagccccctgtatgcgaagtacgggcagtcgatc
gaccgcgagtcggcctacgagatgctcgccgccaacaccctggcgcccggcgagcctgcc
gacgcgcccgcaccggcacccatcccggctccggcacccgctcccatgcctgctccggca
ccgaaacccgtccccgaggaaccgggcatcatcacggaggtgctgaccagcaagcccatg
cagagctttctgcggtccgcggccagcgccgcgggacgcgagttcagccgcgcgatcttc
ggcacgggtcggcgccgcaagcggtga
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