Gordonia rubripertincta: GCWB2_15340
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Entry
GCWB2_15340 CDS
T05629
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gru
Gordonia rubripertincta
Pathway
gru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GCWB2_15340 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gru03019
]
GCWB2_15340 (orn)
03009 Ribosome biogenesis [BR:
gru03009
]
GCWB2_15340 (orn)
Messenger RNA biogenesis [BR:
gru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GCWB2_15340 (orn)
Ribosome biogenesis [BR:
gru03009
]
Eukaryotic type
Pre-60S particles
RNases
GCWB2_15340 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PH_32
Motif
Other DBs
NCBI-ProteinID:
ASR03856
LinkDB
All DBs
Position
3354207..3354791
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AA seq
194 aa
AA seq
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MWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDEALASMPDVVTKMHAD
SGLTEEVRASTVTLVEAEKLVLDYIRKHVTTPGAVPLAGNSIATDRGFIARDMPELDAYL
HYRMVDVSSIKELARRWFPKVYFGQPDKGLAHRALADIRESIRELRYYRAAAFVPAPGPD
VDALAKIVEDLGPA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgtggatcgattgcgagatgaccggcctccgactcgagtcggacaagttgatcgagatc
gcggccctggtcaccgacggtgatctcaacatcctgggtgacggcgtcgacgtcgtcatc
cacgccgacgacgaggctctcgcgtcgatgccggacgtcgtgaccaagatgcacgccgat
tccggtctcaccgaagaggtacgcgcgtccaccgtcacgctggtcgaggcggagaagttg
gtgctcgactacatccgcaaacacgtgacgacgcccggcgccgtcccgctggccggcaac
tcgatcgccaccgaccgcggcttcatcgcccgcgacatgcccgaactcgacgcctacctg
cactaccgcatggtcgacgtcagttcgatcaaggaattggcccggcgctggttccccaag
gtgtacttcgggcagcccgacaaaggactcgcccaccgcgccctcgccgacatccgcgag
tcgatccgcgagctccgttattaccgcgcagcagccttcgtgcctgctcccggtcccgac
gtcgatgcgctcgcgaagatcgtcgaggatctcggacccgcctga
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