Gordonia rubripertincta: GCWB2_15820
Help
Entry
GCWB2_15820 CDS
T05629
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gru
Gordonia rubripertincta
Pathway
gru03030
DNA replication
gru03430
Mismatch repair
gru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCWB2_15820 (polC)
03430 Mismatch repair
GCWB2_15820 (polC)
03440 Homologous recombination
GCWB2_15820 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gru03032
]
GCWB2_15820 (polC)
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_15820 (polC)
Enzymes [BR:
gru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCWB2_15820 (polC)
DNA replication proteins [BR:
gru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCWB2_15820 (polC)
DNA repair and recombination proteins [BR:
gru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCWB2_15820 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
UVR
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ASR03951
LinkDB
All DBs
Position
3467306..3469132
Genome browser
AA seq
608 aa
AA seq
DB search
MTAGQLTFADLEAADQATDGDAIASEFSDRALFDTTLVVVDLETTGSSPTDDRITEIGAV
KIRGGEVIGEFATLVDPGRAIPPQIVTLTGITTAMVTDAPRIESVLPAFLEFARGSILVA
HNARFDMGFLRQNTLRLHLDWPFSLSLCTVTMARRILPRDEAPTVKLSALAELFDVSVRP
THRALDDARATVEVFHRLLERVGNQGISTVGELTSYLPRTDPRLRAKRQMADRVPARPGV
YLFRGPSNEVLYVGTAVDLRRRVRSYFSGSDPRRRIAEMVLLAERVDVVECSHALEAAVR
ELRLLAAHAPAYNRRSTQPHKGWWVTLTEERFPRLKVSRTPTDESIGPVGNRNNAATVAD
VIAAAAGLRTCSRRLGATGYHWCPTPDGVRQPGGCHAAAAQPQTVPDYLPRVTAARRLMR
GEADDLLDDLTARLVDLSEAQMFETAARHRDRLALTIDALARCQRLAALCAIAEIVIARP
DDERGWHFAVVRHGRLAAAGRARRGVSPMPVVDALVAAAETVIPETGPLRGAPAEEVALI
YRWMTEPGARIVSTTDPVALPAGCAERRRGWSQSARDARSDARAVVHRTPRAAQRSPIRE
LVATRLAP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgggacaactgaccttcgccgacctcgaggccgccgaccaggccaccgacggc
gacgccatcgcgagcgagttcagcgatcgcgccctgttcgacaccaccctcgtcgtcgtc
gacctcgagacgacgggttccagcccgacagacgaccgcatcaccgagatcggtgcggtg
aagatccgcggcggcgaggtgatcggcgagttcgccaccctcgtcgatccgggccgagcc
atccctccgcagatcgtcacgctcaccgggatcacgacggcgatggtcaccgacgcaccc
cggatcgaatccgtgctgccggcgttcctcgagttcgcccgcggctcgatcctggtcgcc
cacaatgcgcgcttcgacatgggtttcctacgacagaacaccctccgcctccacctggac
tggcccttcagcctgagtctctgcacggtgacgatggcgcggcgcatcctgccgcgcgac
gaggcgcccacggtcaagctcagcgccctggccgaactcttcgacgtctccgtccggccc
acccaccgggccctggacgacgcccgtgccacggtcgaggtcttccaccgtctcctcgaa
cgcgtcgggaaccagggcatctcgacggtcggggaactcacctcttatctgccgcgcacc
gatccccgtctgcgggccaagcgtcagatggccgaccgcgtgcccgcgcgtccgggcgtc
tatctgttccgcgggccgtcgaacgaggtcctctacgtcggtaccgcggtggacctccga
cgccgtgtccgttcctacttctccggcagcgacccccgacgccgtatcgccgagatggtc
ctcctggccgagcgcgtcgacgtcgtcgagtgttcccacgccctcgaggcggccgtccgc
gaactccgactgctcgccgcgcacgccccggcctacaaccggcgttcgacgcagccccac
aagggatggtgggtgacgctcaccgaggagcgtttcccccgcctcaaggtgagccgcaca
cccacggacgagtccatcgggccggtgggcaaccgcaacaacgcggcgacggtggccgac
gtcatcgcggcggccgccggactccgcacgtgctccagacgcctcggcgccaccggctac
cactggtgccccacgcccgacggagtccgtcagcccggcggatgccacgcagccgcggcg
cagccgcagaccgtcccggattacctgccgcgcgtgaccgcggcccgccggctgatgcgc
ggggaggccgacgatctcctcgacgacctcaccgcacgcctcgtcgacctctccgaggcc
cagatgttcgagaccgcggcccgccaccgcgaccggctcgcgctgaccatcgacgccctg
gcgcgatgtcagcggctggccgcgttgtgcgcgatcgccgagatcgtcatcgcccgtccc
gacgacgaacgcggctggcatttcgccgtcgtccgtcacggacggctcgcggcggccggg
cgtgcccggcgaggcgtctcccccatgccggtcgtcgacgcgctcgtcgccgctgccgag
accgtcatccccgaaacgggaccgttgcgcggggctccggcggaggaggtggcgctgatc
taccggtggatgaccgagcccggggcccggatcgtgtccaccaccgacccggtggcactc
ccggcgggatgcgccgaacgccggcgcggctggtcacaatccgcacgcgatgcccgctcc
gacgcccgcgccgtggtgcaccggacaccacgggccgcgcagcgctcgccgatccgcgag
ctcgtggccactaggcttgcgccatga
DBGET
integrated database retrieval system
