Gordonia rubripertincta: GCWB2_16735
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Entry
GCWB2_16735 CDS
T05629
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
gru
Gordonia rubripertincta
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gru03032
]
GCWB2_16735
03036 Chromosome and associated proteins [BR:
gru03036
]
GCWB2_16735
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_16735
DNA replication proteins [BR:
gru03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GCWB2_16735
Chromosome and associated proteins [BR:
gru03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GCWB2_16735
DNA repair and recombination proteins [BR:
gru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GCWB2_16735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ASR04130
LinkDB
All DBs
Position
complement(3659243..3659869)
Genome browser
AA seq
208 aa
AA seq
DB search
MNKAELIDELTKKLDADRKTATEAVELVVDTIVRAVNKGESVTITGFGVFEKRKRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLAANGPAVKRGSGTTAAKKAAPAKKT
AAKKATPAKKTAAKKATPAKKTAAAKKTTAAKKTTPAKKTTAAKKTTTAAKKTTAAKKAA
PAKKTAAKKAPAKKTAAKKAPAKKSTRR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggagctcattgatgagctgaccaaaaagctcgacgcggatcgcaagact
gcgactgaagccgtcgagctcgtcgtcgacacgatcgttcgcgcggtcaacaagggcgag
agcgtgacgatcaccggcttcggcgtcttcgagaagcggaagcgcgcaccgcgcgtcgcg
cgcaacccgcgcaccggcgaaaccgtgaaggtccgtgctacttcggttcccgcgttccgt
ccgggcgctcagttcaaggccgtcgtggccggtaagcagaagcttgccgccaacggtccg
gctgtgaagcgcggcagcggaaccaccgcggccaagaaggcggccccggccaagaagacc
gcagccaagaaggccaccccggcgaagaagaccgccgccaagaaggccaccccggcgaag
aagaccgcggcggcgaagaagaccaccgccgccaagaagaccacgccggcgaagaagaca
accgcagccaagaagacgacgaccgcggcgaagaagaccaccgcggccaagaaggctgct
ccggccaagaagaccgccgcaaagaaggctccggccaagaagactgcggccaagaaggct
ccggccaagaagtcgacgcgacgctga
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