Gordonia rubripertincta: GCWB2_18415
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Entry
GCWB2_18415 CDS
T05629
Symbol
groL3
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gru
Gordonia rubripertincta
Pathway
gru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCWB2_18415 (groL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gru03019
]
GCWB2_18415 (groL3)
03110 Chaperones and folding catalysts [BR:
gru03110
]
GCWB2_18415 (groL3)
03029 Mitochondrial biogenesis [BR:
gru03029
]
GCWB2_18415 (groL3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gru04147
]
GCWB2_18415 (groL3)
Enzymes [BR:
gru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GCWB2_18415 (groL3)
Messenger RNA biogenesis [BR:
gru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GCWB2_18415 (groL3)
Chaperones and folding catalysts [BR:
gru03110
]
Heat shock proteins
HSP60 / Chaperonin
GCWB2_18415 (groL3)
Mitochondrial biogenesis [BR:
gru03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GCWB2_18415 (groL3)
Exosome [BR:
gru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GCWB2_18415 (groL3)
Exosomal proteins of other body fluids (saliva and urine)
GCWB2_18415 (groL3)
Exosomal proteins of breast cancer cells
GCWB2_18415 (groL3)
Exosomal proteins of colorectal cancer cells
GCWB2_18415 (groL3)
Exosomal proteins of bladder cancer cells
GCWB2_18415 (groL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ASR04456
UniProt:
A0AAW4G9N2
LinkDB
All DBs
Position
4005878..4007530
Genome browser
AA seq
550 aa
AA seq
DB search
MAKELRYNAEARLRLERGVNALADAVKVTLGPKGRNAVLEKLTGPPTITNDGVTIAREIQ
LRDPFANMGAQLVKEVAMKTNGVVGDGTTTATVLAQAMVREGLRAVEQGANPMRVRRGIE
RAISTVIDALSEQSVALGGRSDLERIATLAASDDEVIGSAIAAAVEYVGRNGVITTEESD
TLGLSVDVVDGIEFDHGYISGYMVTNPERMEAVLDNPVVLLTNKKITSVQEIMPSIEAAK
RADRPLVVLAEDVDGPALQLLVGGNMHKTMQSVVVRAPGFGHRRVAELEDLAVALGGHVI
AKDTGLELHEVSLEHLGQCDRITVTEDSTTIVGARGDQTLVDARVAQLEAQHARARIDAD
RDSLELRIARLTGRVAVIRVGGVTSVELKERMLRVEDALAATRAAVEDGIVSGGGTALAQ
AHRALESLGDVGGDEGAGIGVVRRSMAEPLFWIATNAGFDGEEVVKVVSGLPLGHGFNAM
TGNYGDMFDEGVIDPAKVTKAALESAASIAALLITTETAVVEEVFTHPGAIEAPGFGDLA
EGMVRPSNIY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggagttgcgctacaacgccgaagcgcgactgcggctcgagcgaggagtgaac
gcactcgccgacgcggtcaaggtgacattgggaccgaagggccgcaacgcggtcctcgag
aagctcaccggcccaccgaccatcaccaacgacggggtgaccatcgcccgcgagatccag
ttgcgcgatccgttcgccaacatgggcgcacagttggtcaaggaagtggcgatgaagacc
aacggggtcgtcggtgacggcaccaccaccgcaaccgtgttggcgcaggccatggttcgc
gaaggtctgcgcgccgtcgagcagggcgccaacccgatgcgggtgcgccgcggtatcgag
cgtgcgatcagcacagtcatcgacgcgctgtcggaacagtccgtcgcactcggcggccgc
agcgatctcgaacgcatcgcgaccctggccgcgagtgacgacgaggtcatcggttcggcc
atcgccgccgcggtcgaatacgtcggccgcaacggcgtcatcaccaccgaggagagcgac
accctcggcctgtcggtggacgtcgtcgacggcatcgagttcgaccacggttacatctcc
gggtacatggtcaccaatcccgaacggatggaagcggttctggacaacccggtggtcttg
ctgacgaacaagaagatcacctcggtgcaggagatcatgccgagcatcgaggcggccaaa
cgcgccgaccgtccgctggtcgtgctcgccgaggacgtcgacggtcccgccctgcaactg
ctcgtcggcggcaacatgcacaagacgatgcagtcggtggtcgtccgggcacccggtttc
ggtcatcgccgcgtcgccgaactcgaggatctcgccgtcgcgctcggtggtcacgtgatc
gccaaggacaccggcctcgagctgcacgaggtctccctcgaacacctcggacagtgcgac
cggatcaccgtcaccgaggactcgaccacgatcgtcggtgcgcggggcgaccagaccctc
gtcgacgctcgtgtcgcgcaactcgaggcgcagcacgcacgtgcgcggatcgacgccgac
cgggacagcctggagctacggatcgcgcgcctcaccggccgggtcgcggtcatccgagtc
ggtggcgtgaccagcgtcgaactgaaggaacgcatgctccgcgtcgaggacgccctggcc
gcgacgcgggcggcggtcgaggacggcatcgtctccggtggcggaaccgcgctggcacag
gcacatcgggccctcgagtcgctgggcgatgtgggcggtgacgagggcgccggcatcggc
gtcgtccgccggtcgatggccgaaccgttgttctggatcgccaccaacgccggcttcgac
ggcgaggaggtggtcaaggtcgtgagcggactgcccctcggccacggattcaacgcgatg
accggcaattacggcgacatgttcgacgaaggcgtcatcgacccggccaaggtcaccaag
gccgcgctggagagcgccgcgtcgatcgccgcactgctgatcaccaccgagaccgcggtc
gtcgaggaggtgttcacgcatccgggcgcgatcgaggccccgggcttcggtgatctcgcc
gaggggatggtgcggccctccaacatctactag
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