Gordonia rubripertincta: GCWB2_18655
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Entry
GCWB2_18655 CDS
T05629
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gru
Gordonia rubripertincta
Pathway
gru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCWB2_18655 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gru03021
]
GCWB2_18655 (rpoA)
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_18655 (rpoA)
Enzymes [BR:
gru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCWB2_18655 (rpoA)
Transcription machinery [BR:
gru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GCWB2_18655 (rpoA)
DNA repair and recombination proteins [BR:
gru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GCWB2_18655 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ASR04504
UniProt:
A0AAW4G1I1
LinkDB
All DBs
Position
complement(4056627..4057679)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLTEEVIAENRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAITSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSDEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFSLPIEDLELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHALGLSLKDSPASFDPSQVAGYDPATGTWSEDASFDADSGEDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccaccctcaccgaggaagtcatcgccgagaaccggtcgaag
ttcgtcatcgaaccgctcgagccgggcttcggttacaccctcggtaactcgctgcgccgt
accctgctcagctcgatcccgggtgctgccatcaccagcatccgcatcgacggtgtcctc
cacgagttcaccaccgtccccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggcctcgtggtctcctcggacgaggacgagccggtcaccatgtacgtgcgcaagcag
ggtccgggcaccgtcaccggcgccgacatcgtgcccccggccggtgtcaccgtgcacaac
cccgatctgcacatcgccaccctgaacgacaagggcaagctcgagatcgagctcgtcgtc
gagcggggccgcggctacgtgccggccgtgcagaacaaggcgtcgggtgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgatcggctcgtgctggacgtggagaccaagaac
tcgatcagcgcgcgtgacgcgctggcgtcggcgggcaagaccctggtggagctcttcggg
ctcgcccgggagctcaacgtcgaggccgagggcatcgagatcggaccgtctccggcggag
gccgaccacatcgcgtcgttcagcctgccgatcgaggatctggagctgaccgtccgttcg
tacaactgcctcaagcgcgagggtgttcacaccgtcggcgagctggttgcccggaccgag
tcggatctgctcgacatccgcaacttcggccagaagtcgatcgacgaggtcaaggtcaag
ctgcacgcgctcggcctgtccctcaaggacagcccggccagcttcgatccgtcgcaggtc
gccggatacgaccccgccaccggtacgtggtcggaggacgcgtcgttcgacgccgattcc
ggtgaggatttcgccgaaaccgaacagctctag
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