Gordonia rubripertincta: GCWB2_19295
Help
Entry
GCWB2_19295 CDS
T05629
Symbol
acoR5
Name
(GenBank) Acetoin dehydrogenase operon transcriptional activator AcoR
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gru
Gordonia rubripertincta
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gru03000
]
GCWB2_19295 (acoR5)
Transcription factors [BR:
gru03000
]
Prokaryotic type
Helix-turn-helix
Other families
GCWB2_19295 (acoR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
AAA_16
AAA_22
HTH_23
HTH_30
AAA
AAA_25
nSTAND3
HTH_28
HTH_29
SLFN-g3_helicase
HTH_50
AAA_18
AAA_24
RWP-RK
HTH_22
ATPase
Motif
Other DBs
NCBI-ProteinID:
ASR04632
LinkDB
All DBs
Position
4226368..4228068
Genome browser
AA seq
566 aa
AA seq
DB search
MCHVGLIDTLPARPDRTPQRPVIEHSWRRSALSGVRPEDNIPARLGDIGSADPLLDAARP
VLDDAAARLADTDVSLLLVDHECRMVTRVAFGTAVERRLDAIGAAPGVPFGEDMVGTTAL
GTPAETRGGVIVNSSEHYLEQFRSISCFGQPIIHPATRRLAGIICMSEIADRINPLAVPV
VNGIVADIADRLLDRSRAHQRRVLDAFQRAAPRRDVAVAAIGDDLQLTNALAAELLSPTD
IGALRAIATDPALRATTLPLTLVSGASVEIAVEPVAGTRGAALFRFRPLITPTPTRPAPV
RPSSTTVAVSGEPGTGRTTLALELAAEASDTEAGDLETGGTEAVDTEFRAVIVDVADELI
SGRQVDITTALARARSSGVPLVIDGVDLLDDRSIALLTRATASTPAASPLILVSGPRAQA
SPAVAALLGRCARRVDPAPLRHRTSELAAIASGVVGDIDPELTLSGPATDALLSQDWPGN
FTELIAVLRQAAAACRGRMARVVEAADLPSAYRTTSRAAHLSGREQAERAAIVDALDRAG
GNKVHAARDLGISRTTLYARMRALGI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtcacgttggtctcatcgacactctcccggcccgtcccgatcgaacgccgcagcgc
ccggtcatcgagcactcgtggcgtcggtcggcgctgtcgggagtgcggccggaggacaac
atccccgcgcgtctgggcgacatcggatccgccgaccctctgctcgacgcggcgcgtccc
gtcctcgacgacgcggcggcccggctcgccgacaccgacgtgtcactgttgctcgtcgat
cacgagtgccggatggtgacgcgggtggcgttcgggaccgccgtcgaacgtcgcctcgac
gcgatcggcgcggcgcccggcgtcccgttcggcgaggacatggtcgggaccaccgccctc
gggacacccgcggagacgcgcggcggggtgatcgtcaacagctccgagcactatctcgaa
cagttccggtcgatcagctgcttcggacagccgatcatccatcccgcgacccggcgcctg
gccgggatcatctgcatgtccgagatcgccgaccgcatcaaccctctcgcggtccccgtc
gtcaacggcatcgtggccgacatcgccgaccgtctgctcgaccggtcccgcgcacaccag
cgccgcgtcctcgacgccttccagcgcgccgccccgcgccgggacgtcgcggtggccgcg
atcggcgacgacctgcagctcaccaatgccctggccgccgaactgctctcccccaccgac
atcggtgcgctccgggcgatcgccaccgacccggcgctgcgggcgacgacgctgccgttg
acgctcgtctcgggcgcgtcggtcgagatcgccgtcgaacccgtggccggtacccggggg
gccgcactgttccgctttcgccccctgatcacacccactccgacccgcccggccccggtc
cggccgtcgtcgacgaccgtcgcggtgtccggtgaacccggcaccggacgcacgacgctg
gcgctcgagttggcggcagaagcctcggacaccgaggccggcgacctggagacaggcggc
accgaagcggtcgacaccgagttcagggcggtcatcgtcgacgtcgccgacgagctgatc
agcggccggcaggtggacatcaccaccgccctcgcgcgagccagatcgtcgggcgtcccc
ctggtcatcgacggtgtggacctgctcgacgaccggtcgatcgcgctgctcacccgcgcc
acggcatcgacgccggcagcgtctcccctgatcctcgtcagcggtcctcgcgcgcaggcg
tcacccgcggtcgccgccctgctcggccggtgtgcgagacgcgtcgatcccgcgccgctg
cgccaccgcacctcggagctcgcggccatcgcgagcggagtcgtcggtgacatcgatccg
gaactcaccctgtccgggccggcgaccgatgccctgctcagccaggactggccgggcaac
ttcaccgagctgatcgcggttctgcggcaggccgcggcagcgtgccggggtcgaatggca
cgagtggtcgaggcggccgatctcccgtctgcctatcggacgacgagtcgggcggcccat
ctgtcggggcgggagcaggccgagcgcgccgcgatcgtcgacgccctcgaccgtgccggc
ggcaacaaggtccacgccgcgcgggacctcgggatcagtcgcaccacgttgtacgcgcgg
atgcgagccctcgggatctag
DBGET
integrated database retrieval system
