Granulicella sp. WH15: FTO74_18160
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Entry
FTO74_18160 CDS
T06415
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
grw
Granulicella sp. WH15
Brite
KEGG Orthology (KO) [BR:
grw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
grw03009
]
FTO74_18160 (rlmD)
Enzymes [BR:
grw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FTO74_18160 (rlmD)
Ribosome biogenesis [BR:
grw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FTO74_18160 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QHN05063
LinkDB
All DBs
Position
4398207..4399490
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AA seq
427 aa
AA seq
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MALRIERMKYGGAGVGVDATGAETDVPFTLPGELVDLAVTDSVQVVEASAQRVEPECRHF
GSCGGCQYQHASYPAQVEIKSGILREILSQAGAGPVPEIELRTGEPWGYRNRVRMRVQAL
DGQLRVGHSRRSSNEFLPIEECPIAAPVLWRAAEALIQLAAEDAVVRRWLEHVAEVEFFC
SADQARVQMALFLRDADVARNEPFTVFCEKVKALLPEMVGANAEIDPELSRRARRSWPGA
TWGAAGLVYEAAGAKYWVSRGAFFQVNRFLVDEMVALATAGRSGQLAWDLFAGVGLFSRG
LAGGFAEVVAVEGNPVAAGDLAKLAKNVKAVEGATVDFLRRAVLERERPELIVMDPPRAG
AGAEGCGLLGRIGAPALVYVSCDPVTLGRDLAVLARAGYGMERVWMVDMFPQTFHLETVV
WLRKDAA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcgaatcgagcggatgaagtacggcggggccggtgtgggagtcgatgccacg
ggtgcggagacggacgtgccctttaccctgccgggagagttggtggatctggcggttact
gattctgtgcaggttgtcgaagcctccgcgcagcgtgtcgaaccggagtgccgccacttc
ggcagttgtggaggctgtcagtaccagcacgccagctatcccgcccaggtcgagatcaag
tccggaatcctgcgggagattctctcccaggcaggtgcggggccggttccggagatagaa
cttcgcaccggcgagccgtggggataccggaatcgcgtgcggatgcgggtgcaggcgctg
gatgggcaactccgcgtcgggcacagccgccggtcgtcgaacgagtttctacctatagaa
gagtgccccatcgccgccccggtactgtggcgggcagcggaggcattgatacaactggcc
gccgaggacgccgttgtacgccgttggctggagcatgtggccgaggtggagtttttctgc
tccgccgaccaggcgcgggtgcagatggcactcttcctgcgggatgcggatgtggctcgg
aatgagccgtttacggtcttctgcgagaaggtgaaggctctgctgccggagatggtcggg
gccaacgccgagatcgacccggagctgagccgacgcgcccgcaggagctggccgggagca
acgtggggagcagcagggctggtctacgaggccgccggagccaagtattgggtgagccgt
ggagcgttcttccaggtgaaccgctttctggtcgacgagatggtggctctggcgacggcg
gggcggagcggccagttggcgtgggatctctttgccggagtgggtttgttttcgcggggg
ctggccgggggctttgccgaggtggtggccgtggagggcaacccggtggccgctggggac
ctggcgaagctggcgaagaatgtgaaggcggtcgagggcgcgacggtcgattttctgcgc
cgggcagtgctggagcgggaacggccggagttgatcgtgatggacccgccacgcgccggg
gccggggccgaagggtgcgggctgctggggcggatcggcgctccggcgctggtttacgtc
tcctgcgacccggtgacgctggggcgggatcttgcggtgctggcgcgggcgggatacggg
atggagcgggtgtggatggtggatatgtttccccagaccttccatctggagacggtggtc
tggctgcgcaaggacgcggcttag
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