Gryllotalpicola protaetiae: D7I44_05790
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Entry
D7I44_05790 CDS
T05660
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gry
Gryllotalpicola protaetiae
Pathway
gry00521
Streptomycin biosynthesis
gry00523
Polyketide sugar unit biosynthesis
gry00525
Acarbose and validamycin biosynthesis
gry00541
O-Antigen nucleotide sugar biosynthesis
gry01100
Metabolic pathways
gry01110
Biosynthesis of secondary metabolites
gry01250
Biosynthesis of nucleotide sugars
Module
gry_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D7I44_05790 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D7I44_05790 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D7I44_05790 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D7I44_05790 (rfbB)
00525 Acarbose and validamycin biosynthesis
D7I44_05790 (rfbB)
Enzymes [BR:
gry01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D7I44_05790 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
adh_short
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
AYG03086
UniProt:
A0A387BQ37
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All DBs
Position
1178491..1179489
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AA seq
332 aa
AA seq
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MRKVLVTGGAGFIGSNFVHYLIENTDDHVTVLDKLTYAGNLASLEGLPEDRFTFVKGDIA
DASVVEPLVAASDVVVHYAAESHNDNSLHDPRPFLDTNIIGTFTLLEAVRKHGVRYHHIS
TDEVYGDLELDDPQRFTEHTPYNPSSPYSSTKAGSDLLVRAWVRSFGVRATISNCSNNYG
PYQHVEKFIPRQITNVLTGERPKLYGAGLNVRDWIHANDHSSAVLTIVEKGVIGETYLIG
ADGEKDNKSVVELILTLTGNPADAYDHVVDRAGHDLRYAIDSTKLRTELGWQPRYQDFEA
GLAATIDWYRANEAWWQPQKAATEAKYVAQGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagtcctcgtcaccggtggcgccggcttcatcggctcgaacttcgtccactac
ctgatcgagaacaccgacgaccacgtcaccgttctggacaagctgacctacgcgggcaac
ctcgcgagcctcgagggcctgcccgaggaccgcttcaccttcgtcaagggcgacatcgcc
gacgcctccgtcgtcgagccgctggtcgcggcatccgacgtcgtcgtgcactatgcggcc
gagagccacaacgacaactcgctgcacgacccgcgcccgttcctcgacacgaacatcatc
ggcaccttcactctgctcgaggccgtgcggaagcacggggtgcgctaccaccacatctcg
accgacgaggtctacggcgacctcgagctcgacgacccgcagcgcttcaccgagcacact
ccctacaaccccagcagcccctactcgagcaccaaggccggcagcgacctgctcgtgcgc
gcctgggtgcgcagcttcggcgtgcgggcgacgatctcgaactgctccaacaactacggg
ccgtaccagcacgtcgagaagttcatcccgcggcagatcacgaacgtgctcaccggcgag
cgccccaagctgtacggcgcgggcctcaacgtccgcgactggatccacgcgaacgaccac
tcgagcgccgtgctgaccatcgtcgagaagggcgtcatcggcgagacctatctcatcggc
gccgacggcgagaaggacaacaagtcggtcgtcgagctgatcctgacgctgacgggcaac
ccggcggatgcctacgaccacgtcgtcgaccgcgcgggccacgacctgcgttacgccatc
gactcgaccaagctgcgcaccgagctcggctggcagccgcggtatcaggacttcgaggcc
ggccttgccgccacgatcgactggtaccgcgcgaacgaggcgtggtggcagccgcagaag
gcggcgaccgaggcgaagtacgtcgcccagggccagtag
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