Gryllotalpicola protaetiae: D7I44_17480
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Entry
D7I44_17480 CDS
T05660
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gry
Gryllotalpicola protaetiae
Pathway
gry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7I44_17480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gry03019
]
D7I44_17480
03009 Ribosome biogenesis [BR:
gry03009
]
D7I44_17480
Enzymes [BR:
gry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
D7I44_17480
Messenger RNA biogenesis [BR:
gry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D7I44_17480
Ribosome biogenesis [BR:
gry03009
]
Prokaryotic type
rRNA processing factors
D7I44_17480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AYG05126
UniProt:
A0A387BVI3
LinkDB
All DBs
Position
complement(3584744..3587173)
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AA seq
809 aa
AA seq
DB search
MVEKDEYNSSNEAGKRRGRFFGGRRRRAGEADAPVETVTQPAPEAPEVAETEEPAELAAP
VVDAEAVAADQDHPLAPAVPQPLTTPIPVVGTQADPLSGPVSTTTLLFQAPPVITAPAFD
EDDEADADASAPGVRRRRRRGGSAGASDDQPREPRQPVKREPELITEPQKVKGSTRLEAK
KQRRRDGRDAGRRRAVITEAEFLARREAVDRTMVVRSKAGRIQIGVLEDKVLVEHYVAKS
QEASLIGNVYLGKVQNVLPSMEAAFVDIGRGRNAVLYSGEVDWEAAQAESGEKNQPRRIE
LALKPGDKVLVQVTKDPVGHKGARLTSQVSLPGRYLVYVPNGSMNGISRKLPDTERARLK
KILKEALPDNVGVIVRTAAEGATEEQLTLDVTRLTSQWAQIREANEKVQAPALLHSEPDL
LIKIVRDVFNEDFQKMVIQGDDARETIERYLSGVAPELLERVEPYSGGKDDAFDEFRISE
QIEKALDRKVWLPSGGSLIIDRTEAMTVIDVNTGKFVGSGGNLEETVTKNNLEAAEEIVR
QLRLRDIGGIVVVDFIDMVLESNRDLVLRRLVECLSRDRTKHQVAEVTSLGLVQMTRKKL
GLGLLETFSEPCEVCAGRGIIVHHDPVVKHRAQQPERGTERRRGRGGNGGSAPATSTGNG
NGAHAHEGTHQLTEEARSSLARIAASTLGHPTTGAVPIIADEPQPEQAAATDEAPRSSSR
RSRSRRARGGGAGDAAPSEQPQASVIELPAAQPAQEPRAVNAEATAQLLDSVLDSLPAKQ
PARRSRRVSTGALTAETGQESVPVDGADA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaaaagatgaatacaacagttcgaacgaagcgggaaagcgccgcgggcggttt
ttcggagggcggcgacgcagggccggcgaggccgatgccccggtcgagacggtgacgcag
ccggcgcccgaggctccggaggtcgctgagaccgaagagcctgcggagctggccgctccc
gtggtcgacgcggaagccgtggccgccgaccaggaccacccgctggccccggctgtgccg
cagccgctcaccacgccgatcccggtcgtcggcacccaggccgacccgctcagcggcccg
gtctcgaccacgaccctgctgttccaggctccaccggtcatcacggcgcccgcgttcgac
gaggacgacgaggcggatgctgacgcaagcgctcctggcgtccggcgccgccgtcgccgc
ggcggttcagcaggggcatccgacgaccagccgcgcgaaccacgccagcccgtcaagcgc
gagcctgagctcatcaccgagccacagaaggtcaagggctcgacccggctcgaggcgaag
aagcagcgccgccgcgatggccgcgacgccggccgccgccgcgcggtgatcaccgaggca
gagttcctcgcccgtcgcgaggccgtcgatcgcaccatggtcgtccggtccaaggcaggc
cgcattcagatcggcgtcctcgaggacaaggtgctcgtcgagcactacgtcgccaagagc
caggaggcgtcgctcatcggcaacgtctacctcggcaaggttcagaacgtgctgcccagc
atggaggccgccttcgtcgacatcggtcgcggccgcaacgcggtgctctactcgggcgag
gtcgactgggaggccgcgcaggccgagtccggggagaagaaccagccccgccgcatcgag
ctcgcgctcaaacccggcgacaaggtgctcgtgcaggtcacgaaggaccccgtcggccac
aagggcgcccgcctcaccagccaggtgtcgctgcccggccgctacctcgtgtacgtgccg
aacggctcgatgaacggcatcagccgcaagctgcccgacaccgagcgtgcgcgcctcaag
aagatcctcaaagaggcgctgcccgacaatgtgggcgtcatcgtgcgcaccgcggcggag
ggtgcgaccgaagagcagctgacgctcgacgtcacccgcctcacctctcagtgggcccag
atccgcgaggccaatgagaaggtccaggcgcctgcgctgctgcacagcgagcccgacctg
ctgatcaagatcgtccgcgacgtcttcaacgaggacttccagaagatggtcatccagggc
gatgacgcccgcgagaccatcgagcgctacctctcgggcgttgcgccggagctgctcgag
cgggtcgagccctacagcggcggcaaggacgacgcgttcgacgagttccgcatctccgag
cagatcgagaaggcgctcgaccgcaaggtctggctgccctccggcggctcgctgatcatc
gaccgcactgaggcgatgacggtcatcgacgtcaacacgggcaagttcgtcggctcaggc
ggcaacctcgaagagaccgtcaccaagaacaacctcgaggcggcggaggagatcgtccgc
cagctgcgtctgcgcgacatcggcgggatcgtcgtggtcgacttcatcgacatggtgctc
gagtcgaatcgcgacctcgtgctgcgccggctcgtcgagtgcctgagccgcgaccgcacg
aagcaccaggtcgcggaggtcacctcgctcggcctcgtgcagatgacccgcaagaagctg
ggcctcggtctgctcgagaccttcagcgagccctgcgaggtgtgcgcgggccgcggcatc
atcgtccaccacgaccccgtcgtgaagcaccgcgcccagcagccggaacgcggcaccgag
cgccgccgcggtcgcggaggcaatggcggcagcgcgccggcgaccagcacgggcaacgga
aacggggcccacgcccacgagggcacgcaccagctcaccgaagaggcgcgcagcagcctc
gcccgcatcgccgcgagcacgctcggccacccgacgaccggcgcagtgccgatcatcgcc
gacgagccgcagcccgagcaggcggctgcgaccgacgaggcgccgcgctcgagcagccgc
cgctctcgctcgcgccgtgcgcgcggcgggggagcgggggatgctgcgccgagcgagcag
ccccaggcatccgtcatcgagctgccggccgctcagcccgcgcaggagccgcgcgccgtc
aacgcggaggcgaccgcgcagctgttggactctgtgctcgactcgctgcccgcgaagcag
cctgcgcgacgcagccgccgtgtctcaacgggggcgctgacggctgagaccggtcaggag
tcagtgccggtcgacggcgcggacgcgtag
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