Gemella sanguinis: FOC50_04900
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Entry
FOC50_04900 CDS
T06314
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gsa
Gemella sanguinis
Pathway
gsa03030
DNA replication
gsa03430
Mismatch repair
gsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC50_04900 (dnaE)
03430 Mismatch repair
FOC50_04900 (dnaE)
03440 Homologous recombination
FOC50_04900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsa03032
]
FOC50_04900 (dnaE)
03400 DNA repair and recombination proteins [BR:
gsa03400
]
FOC50_04900 (dnaE)
Enzymes [BR:
gsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC50_04900 (dnaE)
DNA replication proteins [BR:
gsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOC50_04900 (dnaE)
DNA repair and recombination proteins [BR:
gsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOC50_04900 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGS07642
LinkDB
All DBs
Position
1055539..1058817
Genome browser
AA seq
1092 aa
AA seq
DB search
MTYYNLQVHSAYDLLNSTIKYTELFSKLKKDGQDSVVITDPTLYGAIKAYKIAKKFDVNL
VHGLEIKLGYVISFLKFNILCKNTEMFYRLLEISTMIENKVEWSIEKLVEELKKSKEDFV
IIVIDELRDSMEFSYLNDVLKGFDFYFGFNEKFDASLYQYYENVVYTKPSFYLNNDQYQQ
VIVSRAIRDNAKLNITELTTTTGSKFVRTQEDFKNLLNVENPLLKSMLEKALVKQAEVIG
KCRYNLGFKGYHLPKYKYGKDEDVFQNFSSRDYLRYLVQKGAKEKLFGKDLYKYKKRYEY
ELKIIDEMGFNDYFLIVYDFVKYAKSNGILVGAGRGSAAGSLVCYLLNITEADPLEYNLL
FERFLNKERISMPDIDIDFQDTRRDEVIKYVEEKYGEDKVAQIITFTTFQSKSAARESAR
ILQFDDNSLKFISSNISSTRTLKECYESSEPLRNFVNESTINRRWFSIALSLESLPKNPS
VHAAGVVISDNNPLMKYAPLAESNMTKYLTQWTMDDVESVGLLKIDFLGIRYLTMVSSIV
EQIKKENPEFDITKINYKDPKVYNLFAEGRTEGIFQFESSGMKEKLRLLKPTEFNDIVAM
NALYRPGPMAQIETYIRRKHGEEKVNYPHPNLEKILKDTYGVIVYQEQIMLIAVNFAHMS
LNEADNMRRAVSKKKKEDLEYYGRIFIEKSVAAGYDRNVAKSLFDLIVTFANYGFNKSHA
VVYSMLAYRLAYLKVYYTKYFMTALLNNVISSEKKINEYKQELNNLGIKLIKPDVNVSLS
DFSVYKQDIVFALTAIKNVGYRSSYEIVQDRLNFGKYLDIDDFLKRMNKKVDYQAAASLV
KAGALDTFGYNRATLMKKVKDYYEDNRQYINNVRVALSAETGLTLKVEEVEDYSITERIQ
MEKEVTGTYFLKHPVQVEKEKYSYLPLQYIGRDITDSYVEVITKKEIKTKNGDYMAFLTV
NDGKNDYDITVFPSVYKYANTFIKVGEFVVMTLKKQVRNNREQYILEKFASLENYNNFCL
KNIKIIYTVIDESISQLISNYITDKSAVKVIMLRSNNSTQAKTVYVKNEQEFVHKFLENL
PEKPLKIAYKDK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgacttattacaatttgcaagtgcatagtgcatatgatttattaaatagtacaatcaaa
tatactgagttatttagtaagttaaaaaaagatgggcaggatagtgtagttattactgat
ccgacgctttacggagctataaaagcttataaaattgctaaaaagtttgatgttaattta
gtgcacggtttagagataaagttaggttatgtcattagttttttaaagttcaatatacta
tgcaaaaataccgaaatgttttatcgtttgttggaaatatcaacaatgatagaaaacaaa
gtagaatggtctattgaaaaacttgtcgaagaactaaaaaaatctaaagaagactttgtt
attattgttattgatgaacttcgagacagtatggagtttagctatttaaatgatgtgtta
aaaggttttgatttttatttcggttttaatgaaaagtttgatgctagtctttatcaatat
tatgaaaatgtagtttatacaaaaccaagtttttatttaaataatgatcaataccaacaa
gtaattgttagtcgtgcaattagggacaacgccaaacttaatattactgaattaactacg
actactggtagtaaatttgttagaactcaagaagactttaagaatctgcttaatgttgag
aatccattattgaaatcaatgttagaaaaagcactagttaaacaagcagaagtcattggt
aaatgtcgatacaacttaggttttaaagggtatcatctacctaaatataaatatggaaaa
gatgaagatgtattccaaaatttctcatcaagagactatctgcgttatttagttcaaaag
ggtgcgaaagaaaaattatttggtaaagatttatacaagtataaaaaacgctatgagtat
gaacttaaaatcatcgatgaaatgggctttaatgactatttcttaatagtttatgatttt
gttaagtatgccaaaagtaatgggattttagtaggggctggacgtggtagtgcagcggga
agtttagtttgttatttattaaacatcacagaagcagatcctctagaatataatttacta
tttgaaagatttctaaataaagagcgtatctctatgccggatattgatatagactttcag
gatacgcgtcgtgatgaagtcattaaatatgtagaagaaaaatatggtgaagataaggta
gcgcagattattacatttacaacgtttcaatctaaaagtgctgcgagagaatctgcgaga
attctgcagtttgatgataattccttgaagtttattagtagtaatattagttctacaaga
actttaaaagagtgttatgaaagttctgagccattacgtaattttgttaatgagagtact
attaaccgccgttggtttagtatagctctgagtttagaaagtctaccgaaaaatccgtca
gttcacgctgcgggtgttgtaataagtgataataatcctcttatgaaatacgcgcctctt
gctgaatctaatatgactaaatatttaacacagtggacaatggatgatgttgagagtgtt
ggattactaaaaatagattttcttggaatcagatatttaacgatggtatctagcattgtt
gaacagattaaaaaggagaatccagagtttgatataacaaagataaattataaagatcca
aaagtatataatctatttgcggaaggaagaacggaaggtattttccaatttgaatctagt
ggaatgaaggaaaaactacgccttcttaaaccaacggagtttaacgatattgttgcgatg
aatgccttatatcgtccagggcctatggcgcaaatagaaacttatattcgaagaaaacat
ggggaagagaaggtaaattatcctcatcctaatcttgaaaaaattcttaaagatacatat
ggtgtaattgtttatcaggaacaaatcatgcttatagcggtaaattttgctcatatgtca
cttaacgaagcggataatatgaggagagctgttagtaaaaagaaaaaagaagatttggag
tattatggacgaattttcatagaaaaaagtgtagctgctggttatgaccgtaatgtggct
aagagtttatttgaccttatcgttacattcgctaactatggatttaataagagtcacgcg
gttgtttatagtatgcttgcgtatcgcttagcttatttgaaagtttattatactaagtac
tttatgactgcattgcttaataacgttattagtagtgagaaaaagataaatgagtataag
caagagcttaataatttaggaattaaattgataaaacctgatgttaatgttagtttaagt
gattttagtgtttataaacaagacatagtcttcgcgctaactgctattaaaaatgttggg
taccgcagtagttatgaaatagttcaagatcgtttgaactttggtaagtacttggatatt
gatgatttcttaaaaagaatgaataaaaaagttgattatcaagcagcagcttctttagta
aaagcaggagcgttagatacttttggttataatcgtgcaacgcttatgaaaaaagttaaa
gattattatgaagataatcgccaatatataaacaatgttagagtagcattatccgcagaa
acaggtctaactttaaaagtagaagaagttgaggactattctattaccgaaagaattcaa
atggaaaaagaagttacaggtacatatttcttaaaacaccctgttcaagtggaaaaagaa
aaatactcgtatcttccactgcaatatattggtcgagatataacggatagttatgtagaa
gttattacgaagaaagaaataaaaacaaaaaacggagactacatggcatttttaactgtt
aatgatggtaaaaatgattatgatataacggtatttcctagtgtttataaatacgcaaat
acttttataaaggtcggagagttcgtagtgatgactttgaaaaaacaagttagaaataat
agggaacaatacatacttgaaaagttcgctagtttagaaaattataataatttttgtctg
aaaaatataaaaattatttatactgtcatcgatgaatcgatttctcagctgatttctaac
tatattactgataaatcagctgttaaggtgattatgctacgtagtaataactcaacgcag
gctaaaacagtgtatgtaaaaaatgaacaggaatttgttcataaatttttggaaaatcta
cctgaaaagcctttaaaaatagcgtataaggataaataa
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