Gemella sanguinis: FOC50_05960
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Entry
FOC50_05960 CDS
T06314
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gsa
Gemella sanguinis
Pathway
gsa03030
DNA replication
gsa03410
Base excision repair
gsa03420
Nucleotide excision repair
gsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC50_05960 (polA)
03410 Base excision repair
FOC50_05960 (polA)
03420 Nucleotide excision repair
FOC50_05960 (polA)
03440 Homologous recombination
FOC50_05960 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsa03032
]
FOC50_05960 (polA)
03400 DNA repair and recombination proteins [BR:
gsa03400
]
FOC50_05960 (polA)
Enzymes [BR:
gsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC50_05960 (polA)
DNA replication proteins [BR:
gsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FOC50_05960 (polA)
DNA repair and recombination proteins [BR:
gsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FOC50_05960 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC50_05960 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
COMMD1_N
HHH
Motif
Other DBs
NCBI-ProteinID:
QGS07828
LinkDB
All DBs
Position
1254555..1257194
Genome browser
AA seq
879 aa
AA seq
DB search
MDKIILLDGNSLSYRAFYAMPALKNKKGLYTNSVYGFTLMLERILEDTKPKYALVAFDKG
KETFRHKSYEAYKGTRDKTPTELVEQFGYVRELIESYGIKYEEHLDYEADDIIGSYAKIA
EKAGLEVIIVSGDKDLTQLASDNITVYYTKRGVTEIDYYTPEFINEKYGLTPQQIIDMKG
LMGDKSDNIPGIPGVGEKTAIKLLTEYENVENVLENIDNISGKKLKERLTEGKEDAILSK
KLATIFTDVPVDNKIEDLTFKEDREKKKELFEKLEFVSFLRKLSQENSAADESETETKEE
KIKKDIEIQIADKDTKLNFKKSSLHIECYTEDYQNSDVLGVSVYVGDTAYIFSEENFFDN
KYAIEYLQSQEEKTVYDIKKIIYIAKKNNKKINGDVFDIKIANYLIDVTSKSEIDKIVFN
YLGEIISSNEEIYGKGAKRSLPTQEVLNSYIAKIAASILEVKPLMIKSLEEENMLDLYKN
IEIKVARVLANMEFEGIHVSKKALDEMSHEFDERIKVLEGSIYTLAGSEFNIASPKQLGV
VLFEDLGLPVVKKTKTGYSTAVEVLEQLQYKHDIIPLIMEYRTLTKLNSTYAKGLVKDIT
REGKIHTRYEQTLTQTGRLSSVNPNLQNIPTRIEEGKKIRKAFIPASNDRVILSIDYSQI
ELRVLAHIAQDKGMIDAFKHDVDIHTKTASDVNGVPLDEVTPTMRREAKAVNFGIVYGIS
DFGLSNNLGITRKRAKEFIEKYLETFKGVDKYMTDIVKFAKEHGYVETLYNRRRSLPEIN
AKNKIIANLNARIAMNTPIQGTAADIIKIAMISAYNYIEESKVDAKLLLQVHDELIFDVS
KDILEEFTDKMVAIMEEAANLDVKLKAEASSGPSWYEAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggataaaataattttattagatggtaatagcttaagttatcgtgctttttatgctatg
cccgctttgaaaaataagaaaggtttatatacaaatagtgtatatggctttactttaatg
ttagaaagaatcttagaagacacaaagcctaagtatgctctagtagcgtttgataaaggg
aaggaaacttttcgtcataagagttatgaagcatataaaggaacgagagataaaacacct
actgaattagtagaacaatttggatatgttagagaactaatagagtcttacggtattaaa
tatgaagaacacttagattacgaggctgatgacataataggtagttacgcgaaaatagcc
gaaaaagcaggattagaagtaattatagtatcgggagataaagacttaactcaacttgct
agtgataatataacagtttactatactaaacgtggagttacagaaattgattactatact
ccagagtttataaatgaaaaatacggtttaacacctcaacaaataatcgatatgaaagga
ttaatgggagataaatctgataacataccaggtattccaggagttggagaaaaaactgct
ataaaactattaactgaatatgaaaatgtagaaaatgtactagaaaatattgataatatt
agtggtaaaaaattaaaagaaagattaactgaaggtaaagaagatgctatattaagtaaa
aaactagcaactatctttactgatgttcctgttgataataaaatagaggaccttactttt
aaagaagatagagaaaagaaaaaagagttatttgagaaattagagtttgtttcattttta
agaaaactatctcaagaaaatagtgctgcagatgaaagtgaaactgaaactaaggaagaa
aaaattaagaaagatatagaaattcaaatagctgataaagacactaaattaaattttaaa
aaaagttcattacatattgaatgttacacagaagattatcaaaattccgatgtattaggt
gtttcagtatatgtaggtgatactgcatatatttttagcgaagagaatttttttgataat
aaatatgcgattgaatatctgcaaagccaggaagaaaaaacagtttatgatataaaaaaa
atcatttatatagctaaaaagaataataaaaaaataaatggggatgtctttgatattaag
attgctaattatctaatagatgttacatcaaaaagtgaaatagataaaatagtatttaat
tatctaggcgagataattagtagtaatgaagaaatctatgggaaaggagctaaacgttcc
ttacctactcaagaagttctaaattcatatatagccaagatagcagctagtattttagaa
gttaagcctctaatgataaaaagtcttgaagaagaaaatatgctagacttatataaaaat
attgaaattaaagtggctagagtattagctaatatggaatttgaaggaatccatgttagt
aaaaaagctttagatgaaatgagtcatgagtttgatgaaagaattaaagttttagaaggc
agtatttatactttagctggttcagaatttaatatagcttcacctaagcagctaggagta
gttctattcgaagacttaggattaccagtagttaagaaaacaaaaacaggttactctact
gctgttgaagtgctagaacagttacaatataaacatgatattattccattaattatggag
tatcgtactttaacaaaattaaattcaacatatgcaaaaggtttagtaaaagatatcaca
cgtgaaggaaaaattcatactcgttacgaacaaacattaacgcaaacaggtagattatct
tcagtaaacccaaatcttcaaaacataccaacaagaatagaagaaggcaaaaagattaga
aaagcatttataccagcttctaatgatagagtaattttatctattgattactctcaaata
gaactgcgagttttagctcacattgctcaagataaaggtatgattgatgcatttaaacat
gatgtagacatacatacaaaaacagcaagtgatgtcaatggtgttccactagatgaagta
acaccgactatgagaagggaagctaaagcagtaaactttggaattgtttatggaatttct
gactttggattatcaaacaaccttggaattactagaaaacgagcgaaagaatttattgaa
aagtatttagaaacatttaaaggtgttgataaatatatgacagatatagtgaaatttgct
aaagaacatggttatgtagaaactttatataacagaagaagaagtttacctgaaatcaat
gcaaaaaataaaataatcgcaaatcttaatgctcgtattgcaatgaatacacctattcaa
ggaactgccgcagatattataaaaatagcaatgataagtgcatataactacattgaagaa
agtaaagttgacgccaaactattgttacaagtacacgatgaactaatttttgatgttagt
aaagatattttagaagaatttactgataaaatggtagctataatggaagaagcggctaac
ttagacgttaagttaaaagctgaagcaagtagtggaccttcatggtatgaagctaagtaa
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