Gemella sanguinis: FOC50_06075
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Entry
FOC50_06075 CDS
T06314
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gsa
Gemella sanguinis
Pathway
gsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC50_06075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsa03019
]
FOC50_06075
03009 Ribosome biogenesis [BR:
gsa03009
]
FOC50_06075
Enzymes [BR:
gsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOC50_06075
Messenger RNA biogenesis [BR:
gsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOC50_06075
Ribosome biogenesis [BR:
gsa03009
]
Prokaryotic type
rRNA helicases
FOC50_06075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
HTH_CLF_N
AAA_19
ERCC3_RAD25_C
AAA_30
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QGS07850
UniProt:
A0ABX6FIB6
LinkDB
All DBs
Position
1281851..1283311
Genome browser
AA seq
486 aa
AA seq
DB search
MTTFEELGVSREVVESLSKMNFQSPTGIQTETIPYVFSGIDILAQAQTGSGKTGAFGIPI
VDIVKRSEDLQSLVLAPTRELAQQVGEQLRLMARAKGLKVSIIFGGTSIERQIQDLKKRP
QIVVGTPGRVIDHINRRTLKLDKLTHLVLDEADEMLNMGFIEDVRFILSKITSNHQTLLF
SATMPKTIMELSKDFMKDYKLIKTMSDEDLNPDIKEYATIARENEKLETLVGFLDVQNPN
LAIVFGRTKRRVDELSSALIAKGYLAEGLHGDITQSKRLEILRKFKNNSLQILVATDVAA
RGIDISDVTHVYNFDIPQDTESYTHRIGRTGRAGKSGVAVTFLNPIEMPYLKDIENSRGE
RMKMLRPYTKEEVKKARHNRLFEEVVSELSDNHVELNSLANKLLAESNAEKIITVLLNKL
INDKKEVDVELSFEKPLPRKQEKGRGSSRSNNRRRRSDNRDRKPKNERRSTDKKFFDKKG
RRMQNK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttgaagaattaggagtcagtagagaagtagtagaatcactttcaaaaatg
aacttccaatctcctacaggtattcaaacagaaacaattccatacgtattttcgggaatt
gatattctagcccaagcacaaacaggatcaggtaaaactggtgcatttgggatacctatt
gtagatatagtaaaaagaagtgaagacctacaatcactagtgttagctcctacaagagaa
ttagcacaacaagttggagaacaactaagattaatggcacgtgctaaaggattaaaagta
agtataatttttggtggaacaagtattgaaagacaaatacaagatctaaaaaaacgtcca
caaatagttgtaggtacaccaggtagagttattgatcatatcaatagaagaacattaaaa
ctagataaattaacacatctagttctagatgaagctgatgaaatgttaaatatgggattc
atagaagatgtaagatttatcctatctaaaataacatcaaatcaccaaacattattattc
tcagctactatgccaaaaacaattatggaactttctaaagactttatgaaagactataaa
cttataaaaacaatgagtgatgaggatctaaatccagacatcaaagaatatgcaacaata
gctagagaaaatgaaaaattagaaacattagttggatttttagatgttcaaaatcctaac
ttagcaattgtctttggacgtactaaacgaagagtagatgaattatctagtgccttaatc
gcaaaaggttacttagctgaaggtttacatggagatatcacacaatctaaacgtttagaa
atcttacgtaaatttaaaaataattcattacaaatattagtagctacagatgtagcagca
cgcgggatagatattagtgatgtaacacatgtttataactttgatattcctcaagacact
gaaagctatacacacagaataggtagaacaggtagagctggaaaatctggagttgcggta
acattcttaaatccaattgagatgccatatctaaaagatatagaaaattctcgtggtgaa
agaatgaagatgcttagaccttatacaaaagaagaggttaaaaaagcacgtcataacaga
ttatttgaggaagtagtatctgaactttcagacaaccatgtagagttaaatagcttagct
aataaattattagctgaatctaatgcagaaaaaataataacagtactattaaataaactt
atcaatgataaaaaagaagttgatgttgaactttcatttgaaaaaccacttcctagaaaa
caagaaaaaggaagaggttcttctagatcaaataatagaagaagacgctctgataataga
gatagaaaacctaaaaatgaaagacgtagtactgataaaaaattctttgacaaaaaagga
agaagaatgcaaaataaataa
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