Gemella sanguinis: FOC50_07005
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Entry
FOC50_07005 CDS
T06314
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gsa
Gemella sanguinis
Pathway
gsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC50_07005 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsa03019
]
FOC50_07005 (pnp)
03016 Transfer RNA biogenesis [BR:
gsa03016
]
FOC50_07005 (pnp)
Enzymes [BR:
gsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FOC50_07005 (pnp)
Messenger RNA biogenesis [BR:
gsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOC50_07005 (pnp)
Transfer RNA biogenesis [BR:
gsa03016
]
Prokaryotic type
tRNA degradation factors
FOC50_07005 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
Spt6_S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QGS08027
UniProt:
A0ABX6FHQ1
LinkDB
All DBs
Position
1470101..1472188
Genome browser
AA seq
695 aa
AA seq
DB search
MFQEKKVYTTKWAGKELTVEIGEMARQANAAVVVKYGDTVVLTTAVASKEAKDVDFFPLT
VNYEEKMYAVGKIPGGFLRREGRPGTEATLAARLIDRPIRPLFEDGFRNEVQVISTVLSV
EYDCDPVMAAMLGSSLSLSVSNIPFKGPIAGVTVGYIDGEYIINPNIEQLEKSEIDLKVA
GTSDAINMVEAGAKEVSEEIMLNAIMFGHEEIKRLIAFQQQIVEEIGQEKMEVELKVIDE
NIYNEVLELALSEMKSAISIKDKQERDEAISAVKEKVVAIFEERASEEDELDIVKEAKLS
LDKIVKDEVRREITEDKVRPDGRALTEIRPLASRIDVLPRTHGSALFTRGQTQSLGVVTL
GNLSDEQIIDDLTQEENKRFMLHYNFPAFSVGEVGFSRAPGRREIGHGALGERALAQVIP
SKEDFPYTIRIVSEILESNGSSSQATICSGSMALMAAGVPIKAQVAGIAMGLVKKDEHYT
ILTDIQGMEDHLGDMDFKVAGTTDGITALQMDIKIDGLSEQILKESLEQARIGRLQILDH
MNETISAPREEVSTYAPKIKIIKIKPEKIKDVIGSGGKVINEIIEKTGVKIDIEQTGEVF
ISSPEIDGINKAIEIIENITREAEVGEIYLAEVKRIEKFGAFVELFPGVDALVHISKLAA
ERVNKVEDVVKVGDTLKVKVIKIDEKGRVDATAHF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagaaaagaaagtatacacaactaagtgggcaggtaaagaattaactgttgaa
ataggagaaatggcaagacaagcaaacgctgcagtagtagttaagtatggagatacagtt
gttttaactacggcggtagcatctaaggaagcaaaagatgtagatttctttccattaaca
gttaactatgaagaaaaaatgtatgctgtaggaaaaataccaggtggatttttaagaaga
gaaggaagacctggaacagaagctacattagctgctcgtcttatagatagacctattcgt
cctctatttgaagatggattcagaaatgaagttcaagttatatctacagtattatcagta
gaatatgattgtgatcctgtaatggcagcaatgttgggaagctcattatctttatcagta
tctaacattccttttaaaggaccgattgctggtgtgacagtaggttatattgatggggaa
tacattattaatcctaatattgaacaattagaaaaatctgaaattgacctaaaagttgca
ggaacaagtgatgcaataaatatggtagaagcaggtgctaaagaagtatctgaagaaatc
atgctaaatgcaattatgtttggtcatgaagaaatcaaacgtttaatagcattccaacaa
caaattgttgaagaaattggtcaagaaaaaatggaagtagaacttaaagttatagatgaa
aatatctataatgaagttttagaattagcattatcagaaatgaaatctgctatttctatt
aaagacaagcaagaaagagatgaagctatctctgctgttaaggaaaaagtagttgctatt
tttgaagaaagagctagtgaagaagatgaattagatatagttaaagaagctaaattatct
ttagataagattgttaaagatgaagttcgacgtgaaattactgaagataaagttagacca
gatggacgtgcattaacagaaattagaccattagcatcaagaatagatgtactaccaaga
acacatggttcagcattatttactcgtggtcaaactcaatcattaggggttgttacttta
ggtaatttatcagatgagcaaattattgatgatttaacacaagaggaaaataaacgcttt
atgttgcactataatttcccagcattctctgtaggtgaagtagggttcagtcgtgctcct
ggtcgtcgtgaaatcggacacggtgcattaggtgaaagagctcttgcacaagtgattcca
tcaaaagaagatttcccgtatacaatccgtatcgtatcagaaatcttagaatctaatggt
tcaagttcacaagcaactatatgttcaggatctatggcgttaatggcggctggtgtacct
attaaggcacaagttgctggtatagcaatgggattagtgaaaaaagatgaacattatact
attttaactgatattcaaggtatggaagaccatttaggagatatggactttaaagtagca
ggtactactgatggtattacagctttacaaatggatatcaaaatagatggtttaagtgag
caaattttaaaagaatcactagagcaagcacgtattggaagactacaaattttagatcat
atgaatgaaacaataagtgctccacgtgaagaagtttcaacttatgcacctaaaattaaa
atcattaaaattaaaccagaaaaaattaaagatgttatcggatctggtggtaaagttatt
aatgaaattattgaaaaaacaggtgttaaaattgacattgagcaaacaggagaagtattt
atttcttcacctgaaatcgatggaattaataaagcaatcgagattattgaaaacataact
cgtgaagctgaagtaggtgaaatttatttagcagaagttaaacgaattgaaaaatttggt
gcatttgttgaattgttcccaggtgtcgatgctcttgttcatatttctaaattagctgct
gagcgtgttaataaagttgaagatgttgttaaagtgggagatactctgaaagttaaagta
atcaaaattgatgaaaaaggtcgagtagacgcaacagctcacttctag
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