Gemella sanguinis: FOC50_07240
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Entry
FOC50_07240 CDS
T06314
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gsa
Gemella sanguinis
Brite
KEGG Orthology (KO) [BR:
gsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsa03032
]
FOC50_07240 (topA)
03400 DNA repair and recombination proteins [BR:
gsa03400
]
FOC50_07240 (topA)
Enzymes [BR:
gsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FOC50_07240 (topA)
DNA replication proteins [BR:
gsa03032
]
Prokaryotic type
DNA Topoisomerases
FOC50_07240 (topA)
DNA repair and recombination proteins [BR:
gsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FOC50_07240 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
Zn_ribbon_RPB9
DNA_ligase_ZBD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QGS08073
LinkDB
All DBs
Position
1514329..1516380
Genome browser
AA seq
683 aa
AA seq
DB search
MAENLVIVESPSKAKTIEKYLGKKYKVISSKGHVRDLPKSRMGVEVQDNGNIGVDYISIR
GKGDVIKSLKKEAKGKKVFLASDPDREGEAIAWHIAHILGLNSNDVNRVVFNEITKDAVK
DAIKHPRKINTDLVQSQQARRILDRLVGYNISPVLWKKVKPKLSAGRVQNAALKLIVDRE
EEIQNFIPQEYWTLPIGFIKNRKILTANFYSFKGEKIKLESKKDVDKIKKAIKGETFKVI
DVVKSKKNRNAPNVYITSTLQQDASRKINFKTRKTMSVAQELYEGINLKKLGGVTGLITY
MRTDSTRVSDEAEKMASEFITKNYGKEYLATSVSSKKSNKNIQDAHEGIRPTNIDFTPDS
IKEYLSNDQYKLYKLIWERFVASRMSPAVYETISTTFENNKVVYRGAESKLLFNGFLTVL
KEKEKIKSVPEFEVGEDAKIKSIDEEQHFTQPPARYSEAKLIAELEDLGIGRPSTYATIV
DTLQKRYYAKLQNKVFTPTELGTLVSKITEEYFPDVINTKFTASLENQLDDIAEGKAEWE
KTIYDFYSGFRKDVEKAESEMEKIEIKQELTGDNCPECGSPLVYKLGKFGKFIACSNFPE
CRYTNTIQKKVGVTCPKCHKHDVLEKKSKRGKVFYGCEGFPKCDFVSWDKPINRQCPKCN
NILFENKKGVYCNNCDYKEEIKK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatttagtaatagtcgaatctccttcaaaagcaaaaacaattgaaaaatat
ttagggaaaaaatataaagtaatatcttcaaaaggtcatgtaagggaccttcctaaaagc
agaatgggagtagaagtacaagataatggtaatataggagtagattatatttctattcgt
ggtaaaggggatgttataaaaagcttaaaaaaagaagcaaaaggaaagaaagtatttctt
gcttccgaccctgatagagaaggagaagcaatagcatggcatattgcacatattttagga
ttaaatagtaacgatgtaaatcgtgttgtatttaatgaaattaccaaggatgctgtgaaa
gatgcaattaaacatcctagaaaaatcaatacagatttagtacaatcacaacaggcgaga
agaatattagatcgtctagttgggtataatatatcacctgtattatggaaaaaagtcaaa
ccaaaactatctgcaggacgagttcaaaatgcagcattaaagttaattgttgatagagaa
gaagaaatccaaaactttattccacaagaatactggacattaccaattggtttcataaaa
aatagaaagatactaactgcaaatttttattcatttaaaggtgaaaagataaaactagaa
agtaaaaaagatgttgataagataaaaaaagcaattaaaggtgaaacatttaaagtaata
gatgttgtaaaatctaagaaaaatagaaatgcacctaatgtatatataacatctacattg
caacaagatgcttctagaaaaattaatttcaaaacacgtaaaacaatgagcgttgctcaa
gaactatacgaaggaattaacttaaaaaaactaggaggagttactgggcttataacatat
atgagaacagactctactagggtatcagatgaagctgagaaaatggctagcgaatttata
acaaaaaattatggtaaagaatatttagctacttcagttagttcaaaaaaatcaaataaa
aacatccaagatgctcatgaaggaatacgtccaacaaatattgactttaccccggatagt
attaaggaatatttatcaaatgatcaatataagctttataaattaatttgggaaagattt
gtagctagtagaatgagtcctgcggtttatgaaactatatcaactacttttgagaataat
aaagttgtgtatagaggagcagagtctaaattactatttaatggttttttaacagtctta
aaagaaaaagaaaaaattaaatctgttcctgaatttgaagttggagaagatgctaagata
aaaagcatagatgaagaacaacactttacgcaaccaccagcaagatattcagaagcaaaa
cttatagctgaattagaagatttaggtattggacgtccatcaacatatgcgacaatagtt
gatacattacaaaaacgatattatgctaaactacaaaataaagtatttacaccaactgaa
ttaggtacattagtaagtaaaataacagaagagtattttcctgatgtaataaatactaag
tttacagcaagtcttgagaatcaacttgatgatattgcagaaggtaaggcagagtgggaa
aaaacaatttatgatttctattctggatttagaaaagatgttgaaaaagcagagtctgaa
atggaaaagatagaaattaaacaagaactaactggggataattgtccagaatgcggctca
cctttagtttataaattaggtaaattcggtaaatttatagcatgttcaaacttcccagag
tgtagatatactaacacaattcagaaaaaagtaggggttacttgtccgaaatgtcataaa
catgatgtactagaaaagaaatcaaaaagaggaaaagtattttatggttgtgaaggattt
ccgaaatgtgattttgtttcatgggataaacctataaatcgacaatgtccaaaatgtaat
aacatcctttttgaaaataaaaaaggtgtctactgcaataattgtgattacaaagaagaa
attaaaaaataa
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