Gemella sanguinis: FOC50_08255
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Entry
FOC50_08255 CDS
T06314
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gsa
Gemella sanguinis
Pathway
gsa03410
Base excision repair
gsa03430
Mismatch repair
gsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOC50_08255 (recJ)
03430 Mismatch repair
FOC50_08255 (recJ)
03440 Homologous recombination
FOC50_08255 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsa03400
]
FOC50_08255 (recJ)
DNA repair and recombination proteins [BR:
gsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FOC50_08255 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FOC50_08255 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FOC50_08255 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
ssDNA-exonuc_C
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QGS08257
LinkDB
All DBs
Position
1734321..1736579
Genome browser
AA seq
752 aa
AA seq
DB search
MGLKYNWNYPQYDETFLNDLKEYNISENIAKILDSRGINKIEEVKKYFSDDYEEGYDPFL
MHDMKRAVERINNAIENEEKILVYGDYDADGITSTVLLVETLVSLGADVSSYIPNRFEEG
YGPNKDAFSKIIKSGISLIITVDNGIAGVDEVELANSLGCDVIITDHHKIQDEIPKAYAV
IHPEHPEGQYPFGKLAGVGVAFKLAHALLEIYPDFLLDLVAIGTVADMVSLTDENRIFVK
QGIELLNEDPRIGIKMLLELSNITTNIDEQTIGFYIAPRLNSIGRMDSAKVGLSFLMAED
ISVAKSLAEQIEEYNVQRKEVTENIVKDVIETIENNDIKNKSVIMVSGDYHEGVLGIVAS
NIVEKYQRPVLIMNNKEGILKGSARSVFNFNIYTAINKIGDKFIAYGGHTLAAGFSFDEQ
NFKEIEKALCDEFDEYKNNNELKSTKNIDIVSSLEEVSYQFLNSLEVLKPFGMDFEKPNI
LLENAKVIEKVYFGADKQYLRLTIADEVGNLECISFKDNMIFKDVNVNDTIDLLCTLDKN
YFNGRTKLQAHIIDMQVKEFLFEDLRYTNFDETTISIDSLKLSKDIDNKQSNYYCYKDLD
NINVEYSNIYLLDIPHSLEDINKILQLKPKKIHLICNDKQIMSEVYKIDKSRLVKLFNFV
LNAPNKQVNITQQLDYLLNLLKTNINSLKIMIQIFQELNLVKVENNIIILNPNYETVDLR
KSSMYVKMENIFEVEKLLLKDSIININKKFEK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgggacttaaatataattggaattatccccaatatgatgaaacttttttgaatgattta
aaagaatataatatatcggaaaatattgctaaaatacttgattctagaggtattaataaa
attgaagaagtaaaaaaatatttttctgatgattatgaggaaggttatgatcctttttta
atgcatgatatgaaacgagcagttgaaagaataaataatgctatagaaaatgaggaaaaa
atacttgtttatggtgattatgatgctgatggaattacttctactgttctactagtagaa
actttagtttcgctaggagctgatgtatcttcatatattccaaatcgttttgaagaagga
tatggtcctaataaagatgctttttctaaaataatcaaatcaggaattagtcttattatt
actgtggacaatggtattgcaggagtggatgaagtagaattagcaaatagccttggttgt
gatgttattattactgaccaccataaaattcaagatgaaattccaaaagcatatgcagtt
attcatccagagcatccagaggggcaatatccatttggaaaattagctggagtgggtgtg
gcttttaaattggcacatgcattattagaaatatatccagattttttactagatttagta
gctattggaacagttgcagatatggtttctcttacagatgaaaatagaatatttgtaaag
caaggaatagagttactaaatgaagatccacgtattggaattaaaatgttattagaatta
tctaatattacaactaatattgatgaacaaactatcggattttatattgcacctaggctg
aactcaataggaagaatggatagtgcaaaggtaggattgtcatttttaatggcagaagat
atttctgttgctaaatctttagcagaacaaatagaagagtataatgttcaaagaaaagag
gtaacagaaaatattgttaaggatgttattgaaacaatagaaaacaacgatataaaaaat
aagagtgtaataatggtctctggagattatcatgaaggagtactaggtattgttgcttct
aatattgttgagaaatatcaaagacctgtacttattatgaataataaagaagggatttta
aaagggtcagcaagaagtgtatttaattttaatatatacactgcaattaataaaatagga
gataaatttattgcatatggtgggcatacacttgcagctggattttcttttgatgagcag
aattttaaagaaatagaaaaagcattatgtgatgagtttgatgagtataagaataataat
gaactaaaatcaaccaaaaacatagatatagtgagtagcttagaagaagtaagttatcaa
tttttaaattcattggaagtattaaaaccgtttggaatggattttgagaaaccaaatatt
ttattagagaatgcaaaggtaatagaaaaagtttattttggtgcagataaacagtattta
cgtttaactattgctgatgaagtaggaaacttagagtgtattagttttaaggacaatatg
atatttaaggatgtaaatgtcaatgatacgatagatttactttgtactttagataaaaat
tattttaatggtagaacgaaattacaagcacatatcattgatatgcaagttaaagagttt
ctttttgaggatttaagatatactaactttgatgaaacgacaattagtatagattcatta
aaattatctaaagatattgataataaacaaagcaattattattgttataaagatttagat
aatatcaatgtagaatattctaatatctaccttttagatattccacattcactagaagat
attaacaaaattttacaattaaaacctaaaaaaatacacttgatttgtaatgacaagcaa
attatgtcagaagtttataaaattgataaatcaagattagtgaagctgtttaattttgta
ttaaatgcaccaaataaacaagtaaatattactcaacaattagattatttactaaattta
cttaagacaaatattaatagtttaaagattatgattcaaatttttcaagaattaaatctt
gtaaaagttgagaataatataataatattaaatcctaattacgaaactgtagatcttaga
aaatcatcaatgtatgtgaaaatggaaaatatttttgaagttgaaaaattacttttaaaa
gatagtattattaatataaataaaaaatttgaaaaatag
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