Geoalkalibacter subterraneus: GSUB_00025
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Entry
GSUB_00025 CDS
T03585
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsb03032
]
GSUB_00025
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_00025
Enzymes [BR:
gsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GSUB_00025
DNA replication proteins [BR:
gsb03032
]
Prokaryotic type
DNA Topoisomerases
GSUB_00025
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GSUB_00025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AJF05295
UniProt:
A0A0B5FMU8
LinkDB
All DBs
Position
6427..8940
Genome browser
AA seq
837 aa
AA seq
DB search
MQEQPPSNRFTVNIEDEMRKSYMDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHDLGNEW
NKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQDFSMRHPLVDGQGNFGSIDGDSAAA
MRYTEVRMARLASELLADIEKETVDHGLNYDESLSEPLVLPAKFPNLLVNGSEGIAVGMA
TKIPPHNLGEVIDGLVAIIDDPRLQIEELIEKIPGPDFPTAGFIFGVEGIREAYRNGRGI
IHMRARALVEVDKRTGREAIIITEIPYQVNKARLIEKIADLVKEKKIEGISDLRDESDRD
GMRIVIELKRDTIPAVILNQLYKMTAMQSSFGIIMLAIVNGQPQILDLRRLLDLFIDHRK
EVVTRRCIFDLKKAEARAHVLEGLKIALENLDEVIAIIKGSSNSGEAKERLIARFQFSDI
QAQAILDMRLHRLTGLERDKIMAEYQEVLALIARLKEILASEVEILKIIRAELIEVKEKF
ANPRRTEIVARTGELSLEDLIVEEDMVVTVSHSGYIKRNAVSLYRAQRRGGKGKTGMRPK
DEDFVERLFIASTHSNVLFFTDQGKVYWLKVHEIPQGGRASRGKAIVNLLNLAPGEKVMT
VLPVKDFVPGKYILTATQNGIVKKTDLMAYSNPRAGGIIALTIDEGDRLIAARLTDGDMD
ILLASRNGKSIRFHETDVRSMGRTARGVRGMALEGDDLVIGMETVTESTAATLVTVTENG
YGKRTSLDEYRVQSRGGKGIITIKASERNGKVVDIKLCEEDSDLMFITDRGKVLRTSVGH
LSIIGRNTQGVRLMVLEPDERIVAVAKLAEKEEDQELDEVLEQADGDAIDDNPDETP
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacaaccaccttcaaatcgcttcactgtcaatatcgaagacgaaatgcgcaag
tcctatatggactacgccatgagcgtcatcatcggacgtgcattgcccgatgtacgcgac
ggcctcaaaccggtgcaccggcgagtgctgttcgccatgcacgacctgggcaacgaatgg
aacaaaccgtacaagaaatcggcgcgtgtggtcggtgacgttatcggtaagtatcacccc
cacggcgattcggcggtctacgataccatcgtgcgcatggcgcaggatttttccatgcgc
catccgctggtggacggtcagggcaatttcggttcaatcgacggcgattccgccgccgcc
atgcgttacaccgaggtgcgcatggcacggctggcttcggagctgctggccgatatcgag
aaagaaaccgtcgatcacgggcttaactacgatgaatcgttgagtgaacccctggttctg
ccggctaaatttcccaacctgctggtcaacggctccgaggggattgcggtcggcatggcg
accaaaattcccccccataacctgggagaagtaatcgacggcctggtggccatcatcgat
gatccgcgtctgcagatcgaagagttgatcgaaaagatcccgggaccggattttcccacc
gccggctttattttcggtgtcgaggggattcgcgaagcctaccgcaatggccgcggcatc
atccacatgcgggcgcgcgccctggtggaagtggacaagcgcaccggtagggaagcgatc
atcatcaccgaaatcccttatcaggtgaacaaggcaaggctcatcgaaaagatcgccgac
ctggtcaaggagaagaagatcgaggggatcagcgacctgcgcgacgagtcggaccgcgac
gggatgcgcatcgtcatcgaactcaagcgagacaccatcccggcggttattctcaaccag
ctctacaagatgacggcgatgcagtcctccttcggcatcatcatgctcgctatcgtcaac
gggcagccgcagattctcgacttgcgccgcctgctcgatctgttcatcgatcaccgcaag
gaagtggtgacgcggcgctgcattttcgatctgaagaaggccgaagcccgcgcccatgtt
ctggaaggcctcaagatcgccctcgagaatcttgacgaggtgatcgcgattatcaagggc
agctccaactccggggaagccaaggagcgcctcatcgcgcgtttccagttttccgacatc
caggctcaggccattctcgatatgcgcctacaccgcctgaccggtctggagcgcgacaag
atcatggccgagtaccaggaggtgctggccctgatcgcgcgactcaaggagattctggcc
agcgaagtggaaattctcaagatcattcgcgccgaactgatcgaggtgaaggaaaagttc
gctaatccgcgccgtaccgagatcgtggcccgcaccggtgaactgtcgttggaagacctg
atcgtcgaagaggatatggtggtcaccgtctctcacagcggctatatcaagcgcaatgcc
gtctccctctaccgcgcccagcgccgcggcggcaagggcaaaaccggcatgcgccccaag
gacgaggatttcgtcgagcggctcttcatcgcctcgacgcacagcaacgtgctgttcttt
accgaccagggcaaagtctactggctcaaggtccatgagattccccaagggggccgcgct
tcgcggggcaaggcgattgtcaacctgctcaatctcgcccccggcgagaaggtgatgacg
gtgctgccggtgaaggatttcgttcccggcaaatatattttgacagccacccagaacggc
atcgtcaaaaagaccgacctgatggcttattccaacccccgtgccggcggtatcatcgcc
ttgaccatcgatgaaggagatcgcctgatcgcagcgcgtcttaccgatggcgacatggat
atcctgctcgccagtcgcaacggcaagtcaatccgcttccatgaaacggatgtgcgttcc
atgggtcgcactgcgcgcggtgtacgcggcatggcgttggaaggtgatgatctggtgatc
ggtatggagacggtcaccgaatccactgccgccacgctggtgaccgtaactgagaacggc
tacggcaagcgcaccagtctggacgagtaccgggtgcagagccgcggcggcaaagggatc
atcaccatcaaggcttcggagcgcaacggcaaggttgttgatatcaagctgtgcgaagag
gattcggatctgatgttcatcaccgaccgtggcaaggtgctgcgcacatcggtcggccat
ctttccattatcgggcgcaatacccagggggtacgcctgatggtcctggaaccggatgag
cggattgtggcggtggccaaactcgccgagaaggaagaggatcaggaactcgacgaggtg
ctggagcaggccgatggggacgcaatcgacgacaatcccgacgaaacgccgtaa
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