Geoalkalibacter subterraneus: GSUB_00510
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Entry
GSUB_00510 CDS
T03585
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSUB_00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_00510
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSUB_00510
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GSUB_00510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_22
AAA_5
UB2H
AAA_16
DUF87
P-loop_SecA
SWI2_SNF2
nSTAND_NTPase5
Kinesin
SRP54
Microtub_bd
Endonuclease_1
Motif
Other DBs
NCBI-ProteinID:
AJF05369
UniProt:
A0A0B5FL27
LinkDB
All DBs
Position
106303..108315
Genome browser
AA seq
670 aa
AA seq
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MARFVLSSQYEPRGDQPAAIAELEAGVERGDQHQVLLGVTGSGKTFTMANVAARLNRPTL
VMAPNKTLAAQLYGEFKELFPQNAVEYFVSYYDYYQPEAYIPTTDTFIEKDSAINEEIDK
LRHSATRSLLTRRDVLIVASVSCIYGLGSPEAYHGMLVELVEGAEIERNALLKRLVEIQY
QRNDVDFHRGTFRVRGDVVEIFPAYEEDRALRVTFFGDEIEEIAEIDPMRGRIIDRLPRV
HVFPASHYVATPPTLERAIKEIQEDLRLRLTELKAQDKLVEAQRLEQRTLFDIEMMEEMG
YCQGIENYSRYLDGRSPGSSPATLLDYFPDDGLLFIDESHVTVPQIGGMYRGDRSRKQTL
VDYGFRLPAALDNRPLTFEEFEARQFQTVYVSATPGDYELKKAHGVVVEQIVRPTGLVDP
PIEVRPAQQQVDDLIHEIRRTVESAQRILVTTLTKRMAEDLTSYLEELGIKVRYLHSDIN
TVERMEIIRDLRKGVFDVLIGINLLREGLDIPEVALVAILDADKEGFLRSERSLIQTCGR
AARNVDGRVIMYADRITRSMQACIDETGRRRETQLAYNAEHGITPQSVKKSLRSILEDIA
ERGDYGELPLAAEEEIPYGSPQDIAREIARVKKEMLAAAADLDFEKAAELRDRMLQLEKQ
ELALRGSPIK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttcgttctttccagccaatacgagccgcgcggcgatcagcccgcggccatc
gccgagcttgaggccggggtcgaacgcggcgaccagcaccaggtgctgctcggcgtcacc
ggctccggcaagaccttcaccatggccaatgtggccgcccgcctcaaccgcccgaccctg
gtgatggcccccaacaagaccctggcggcgcagctctacggcgagttcaaggagttgttt
ccgcaaaatgcggttgagtatttcgtcagctattacgattactatcagcccgaagcctat
attcccaccaccgacaccttcatcgaaaaagacagcgcaatcaacgaagagatcgacaag
ctgcgccacagcgccacccgctcgctgctgacccgccgcgacgtgctgatcgtcgcctcg
gtgtcctgcatctacggtctcggctctcccgaggcgtatcacggcatgctggtggagctg
gtcgaaggggccgagatcgaacgcaatgcgctgctcaagcggctggtggagatccaatac
cagcgcaacgatgttgattttcaccgcggcaccttccgggtgcggggcgatgtggtggag
atttttcccgcctacgaggaggaccgcgccctgcgggtgaccttcttcggcgacgaaatc
gaagagatcgccgagatcgaccccatgcgtggccgcatcatcgaccgcctgccgcgggtg
catgtcttccccgccagccactacgtggcgaccccgccgacgctggagcgtgccatcaag
gagatccaggaggatctgcgcctgcggctgaccgagttgaaggcgcaggacaagctggtg
gaagcgcagcgcctcgagcagcgcaccctgttcgatatcgagatgatggaggagatgggc
tactgccaggggatcgagaactattcgcgttacctcgacgggcgcagccccggttcgtcg
cctgccaccctgctcgactacttccccgatgacgggctgctgtttatcgacgaaagccat
gtcaccgttccgcagatcggcggtatgtaccgcggcgaccgctcacgcaagcagaccctc
gtcgactacggcttccgcctgccggcggcgctggacaaccgccccctgaccttcgaggag
ttcgaggcgcgccagttccagacggtctatgtctccgccacccctggcgactacgagttg
aagaaagcgcacggcgtggtggtggagcagattgtacgccccaccggcctggtggacccg
cctatcgaagtgcggccggcgcagcagcaggtcgatgacctgatccacgaaatccgtcgc
accgtcgagagcgcccagcggatcctggtcaccaccctcaccaaacgcatggcggaggat
ttgaccagctatcttgaagaattgggaatcaaggtgcgctacctgcactcggatatcaac
acggtagagcgcatggagatcatccgcgacctgcgcaaaggggtgttcgacgtgctgatc
ggcatcaacctgttgcgcgaggggctcgatatccccgaggtggcgctggtggccattctc
gatgccgacaaggaagggtttctgcgctcggagcgctcactgattcagacctgcggccgg
gctgcccgcaacgtcgacgggcgcgtcatcatgtacgccgaccgcatcacccgctccatg
caggcctgcatcgatgagaccgggcgccgccgcgagacgcagctggcctataatgccgag
cacggcatcaccccccagtcggtgaaaaagtcgctgcgctcgatcctggaggacattgcc
gagcgcggcgattacggcgagctgccgctggccgccgaggaggagatcccctacggttcg
ccgcaggacatcgccagggagatcgcgcgggtcaaaaaggagatgctggcggccgccgcc
gatctagactttgaaaaggccgccgagctgcgcgaccgcatgctgcagctggaaaagcag
gagctggcgctgcggggttcgcccatcaaataa
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