Geoalkalibacter subterraneus: GSUB_01245
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Entry
GSUB_01245 CDS
T03585
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb00260
Glycine, serine and threonine metabolism
gsb01100
Metabolic pathways
Module
gsb_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GSUB_01245
Enzymes [BR:
gsb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
GSUB_01245
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Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
DAO
NAD_binding_8
Lycopene_cycl
Thi4
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
AJF05477
UniProt:
A0A0B5FBD1
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Position
261857..263524
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AA seq
555 aa
AA seq
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MATQQYDYIIVGGGSAGSVLANRLSVNPDNKVLVLEAGPPDYKLDFRIHMPAALTYPLQG
KTYNWWYESDPEPHMHNRRIYQPRGKVLGGSSCINGMIYIRGNAMDYEKWGKNEGLEKWD
YAHCLPYFRKFETRLKGADEYHGSNGPLYLTTPRCENPLFDAFFKASEQAGHPLVADVNG
YQQEGMSPFDATIYRGRRWNAARAYVHPVKNRENLTIHCRSLATRILFEGNKAVGVAYTR
GGKNEKAYGGEIICCGGAINSPQLLQLSGIGNGAELKKLGIDVVQDLPGVGENLQDHLEL
YVQYACRQPVSMYPALKWYNQPKIGFDWLFKRKGAAATNHFEAGGFIRGNDRVEYPNLQF
HFLPIAIRYDGSAPKQGHGFQLHVGPMNSDVRGRVKIKSADPKQYPSILFNYLSTEQERR
EWVEAIRCSRNIIEQPAFDALRGAELAPGKEAQTDEEILDFVAREGESAYHPSCTCKMGY
DKQAVVDADLRVHGVENLRVVDASVMPSITNGNIYAPVMMIAEKAADTILGNTLEEPSRA
GFYRYDRKKSGATKK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaacaatatgactacatcatcgtgggcggcggttccgccggcagcgttctg
gccaatcgcctcagcgtcaacccggataacaaggtgctggtgctggaagccggtcccccc
gattacaagctggatttccgcattcacatgccggcggctctgacctacccgctgcagggc
aaaacctacaactggtggtatgagtccgatcccgaaccccatatgcacaaccgccgcatt
taccagccgcgcggcaaggtgctgggcggctcgagctgcatcaacggtatgatctacatt
cgcggcaacgccatggattatgaaaagtgggggaaaaacgaagggctcgaaaagtgggat
tacgcccattgccttccctatttccgcaagttcgaaacccgtctcaagggggctgatgag
taccacggttccaacggacctctctatctgaccacgccccgttgtgaaaatcccctgttt
gacgccttttttaaagcctccgagcaggcaggccaccccctggtagcggatgtcaacggc
tatcagcaggaggggatgagccccttcgatgcaacgatctatcgcgggcgtcgctggaat
gcggcccgggcctatgtgcacccggtaaaaaaccgcgaaaatctcaccatccactgccgc
agcctggcgacccgtatcctgttcgaaggcaacaaggcggtgggggtagcctataccagg
ggcggcaagaacgagaaggcctacggcggcgagatcatctgctgcggcggtgcgatcaat
tccccgcagttgctgcagctctccggcatcggcaacggcgcggagctgaaaaaactcggc
atcgacgtggtgcaggatctgccgggggtcggcgaaaacctgcaggatcacctcgaactc
tacgtacagtatgcctgccgccagccggtcagcatgtacccggcgctcaaatggtacaac
cagcccaagatcggcttcgactggctgttcaagcgcaaaggcgctgcggcgaccaatcat
ttcgaggccggcggatttatccgcggcaatgacagggtcgagtatcccaacctgcagttc
catttcctgccgatcgcgattcgctacgacggttcggcacccaagcaggggcatggtttc
cagctgcatgtgggaccgatgaactcggatgtgcgcggtcgcgtcaagatcaaatccgcc
gatcccaagcagtatcccagcatcctgttcaattatctctccaccgagcaggagcgtcgc
gaatgggtcgaggcgatccgctgctcgcgcaacatcatcgagcaaccggccttcgacgcg
ctgcgcggggccgagctggcgccgggcaaagaggcgcagacggacgaggagatccttgat
ttcgtggcacgcgaaggggagagcgcctaccaccccagctgtacctgcaagatgggttac
gacaagcaggcggtggttgatgcagacctcagggtgcatggcgtggaaaacctgcgggtg
gtggatgcctcggtcatgccgagtatcaccaacggcaatatctacgcaccggtcatgatg
attgcggaaaaagccgccgacacgattctcggcaatacgttggaagaaccgtccagagca
ggattctatcggtatgaccgcaaaaaatcaggagccactaaaaagtga
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