Geoalkalibacter subterraneus: GSUB_01295
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Entry
GSUB_01295 CDS
T03585
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb03030
DNA replication
gsb03430
Mismatch repair
gsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSUB_01295
03430 Mismatch repair
GSUB_01295
03440 Homologous recombination
GSUB_01295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsb03032
]
GSUB_01295
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_01295
Enzymes [BR:
gsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSUB_01295
DNA replication proteins [BR:
gsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GSUB_01295
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GSUB_01295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_14
AbfS_sensor
AAA_30
AAA_24
AAA_19
RCF1-5-like_lid
Glyco_tranf_2_5
AAA_assoc_2
Mg_chelatase
TsaE
nSTAND3
PIF1
Motif
Other DBs
NCBI-ProteinID:
AJF05483
UniProt:
A0A0B5FDW4
LinkDB
All DBs
Position
272987..274759
Genome browser
AA seq
590 aa
AA seq
DB search
MSYLVLARKWRPQTFSDLIGQEHVSRTLGNAIRTDRVHHAFLFTGARGVGKTSAARIFAK
ALNCEQGLSDTPCNQCPTCVEITNGHSVDVLEIDGASNTGVDDVRELRESIRYLPSRARY
KIFIIDEVHMLSNSAFNALLKTLEEPPPHAKFVFATTEPHKIPATILSRCQRFDFRKIAL
PHVAERLRYIVDQEGIRVSDHALALIARRGEGSMRDALSALDQVIAFCGEEVRDEDILTL
FGQVERRILLNAIEAILRRDPRRALDVVRRVDDQGQALRPFCGQLVESFRTLVLLKVADD
ACDLVDATPEELEEFRVLIEMVSLEDLQRILTLLMKVVGELPASSFPRLTLEMALVRLTA
LPPAREVGALIRKMEDFERRLGGGEALRSSTPSTSGGTPPLPDPPSDPVRRSAPSERESS
AVPVPPPVEPSSAPSPSSPRQQSPPDRAGAKGRNWQGLVDKIRKVKPLLASFLEHGSLVS
SELPHLEIAFPAGSFYLEQLKDAEKLAQLEKLATQYFEQAVKLKVSILDGNGAAPPPLVE
ERRARQESRRDQLRREALDHPKIRTVLEIFGGDVKEVKPLAPTQGEPSSE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctggtactggcccgcaaatggcgaccgcagacgttctccgacctgatcggg
caggagcacgtcagtcgcaccctcggcaatgccatccgcaccgaccgggtgcaccacgct
tttctgtttaccggcgcgcgcggcgtcggcaaaacctctgctgcgcgcattttcgccaaa
gcccttaactgcgaacagggcctcagcgatacgccctgcaaccagtgccccacctgcgta
gaaatcaccaacggtcacagcgtcgatgtccttgagatcgacggcgcctccaataccggc
gtcgatgacgtgcgcgagttgcgcgaaagcatccgctatctgccttcgcgggcgcgctac
aagatcttcatcatcgacgaagtccatatgctctccaacagcgccttcaacgccttgttg
aagaccctcgaagagccgccgccgcacgccaaatttgtctttgccaccaccgagccgcac
aagattcccgccaccattctgtcgcgctgtcaacggttcgacttccgcaagatcgccctg
ccgcacgttgccgagcggttgcgctacatcgtcgaccaggagggcatccgcgtctccgat
catgcactggcactgattgcgcggcgcggcgaggggagcatgcgtgacgcactctcggcg
cttgatcaggtgatcgctttctgcggcgaggaggtccgggatgaggatatcctgactctt
ttcggacaggtcgaacggcgcattcttctcaatgccatcgaggcgattctgcgccgagac
ccccggcgtgcccttgatgtggtgcgccgtgtcgacgatcagggccaggccctgcgcccg
ttctgcgggcagctggtggagtcctttcgcaccctggtgctgctcaaggtggcggatgat
gcctgcgaccttgtggatgcgactcctgaagagcttgaagaatttcgggtcctgattgag
atggtctctcttgaggatctgcagcgcattctcactctccttatgaaagtggtcggcgag
ttgcccgcttcgtcctttccgcgcttgacgctggaaatggcgctggttcggttgacggct
ctgccgcccgcccgggaggtgggcgcgctgattcgcaagatggaggatttcgagcggcgc
ctgggggggggcgaggcgcttcgaagcagtacgccttccacatccgggggcacgccccct
ctgccggacccgccgtccgatcctgttcgccgttccgctccgtcagagagggagtcttcg
gctgtgcccgtaccgccgccggtagaaccctcttccgcaccgtcgccttcgtcgccccgg
cagcagtcgccgcccgaccgcgctggggccaagggccgcaattggcaggggctggtggac
aaaatccgcaaggtcaaaccgctgcttgccagctttctcgagcatggcagcctggtttcc
tccgagcttccgcatcttgagattgcttttcccgccggttctttttatcttgaacagctc
aaggatgccgaaaaactggcccagctcgaaaagctggctacccagtatttcgaacaggcc
gtgaagttgaaagtatccatccttgacggcaacggggcggccccgccgccgctggtggag
gagcgtcgtgcccggcaggaatcccggcgtgaccagttgcgcagggaggcgctcgatcat
ccgaaaatcaggacggtgctggagattttcggtggtgacgtcaaagaagtcaagccactg
gcccctactcagggtgagccgtcttcggagtag
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