Geoalkalibacter subterraneus: GSUB_02705
Help
Entry
GSUB_02705 CDS
T03585
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsb03009
]
GSUB_02705
Enzymes [BR:
gsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
GSUB_02705
Ribosome biogenesis [BR:
gsb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GSUB_02705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1062
Motif
Other DBs
NCBI-ProteinID:
AJF05697
UniProt:
A0A0B5FBZ2
LinkDB
All DBs
Position
579589..580557
Genome browser
AA seq
322 aa
AA seq
DB search
MATEHNFLFEAQQAPRRLDHFLADELPELSRSQIKRLIEDGQVQVDGRVTKAGEKLKGGE
RLRVIEPAPQAALPVAEAIELEVLYEDSHLIVINKPAGLVVHPAAGHSSGTLVNALLHHC
TDLSGIGGELRPGIVHRLDKETSGVMVATKDDATHQELSRQFKEHSITRRYLALVHGMVQ
NNQGVIDRPIGRHPTDRKKMSSRSGRGRRAVTRWQVLKRFDRDRLTLLELTLETGRTHQI
RVHFADMNLALVGDPVYGSTSRTNALHDLDLRRLVQRLGRQALHAQLLGFVHPATGEYLE
FKSPPPADLQAVLDYLDRLYAE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgagcataattttttattcgaggcgcagcaggcaccacgccgtctcgatcat
tttctcgcggacgaactgcccgaactgagccgatcccagatcaaaaggctgattgaggat
ggacaggtccaggtcgacggcagggtgaccaaggctggagaaaagcttaaagggggggag
cgcctgcgtgtcatcgagcccgccccgcaggctgccctgcctgtcgccgaagcgattgaa
ctcgaagttctttacgaagattcacaccttatcgtcatcaataagccggccggcctggtg
gtgcaccccgctgcggggcactccagcgggacgctggtcaatgccctgctgcaccactgc
accgatctctcggggatcggaggggagttgcggccaggcatcgtccaccgtctcgacaag
gaaacctctggcgtgatggtggcgaccaaggacgacgccactcatcaagagctgtcgcga
cagtttaaagagcattccatcacacggcgctatcttgccctggtgcacggcatggtccag
aacaaccagggagtgatcgaccgccccatcgggcgccaccccactgatcgcaaaaagatg
tcgagccgcagcgggcgagggcggcgtgccgtgacccggtggcaggtgctgaagcgtttt
gaccgcgatcgcctgacgctgctggaattgactctggagacggggcgcacgcatcagata
cgggtccatttcgccgacatgaatctggccctggtaggcgacccggtctacggcagtacc
tcccggaccaacgccctgcatgatctggatctgcgccggctggtgcagcgtctggggcgg
caggcgctgcatgcgcagcttctgggttttgttcaccccgctacgggcgagtatctggag
ttcaaatcccctccgcccgccgatctccaggcggtgctcgactatctcgaccggctctac
gccgagtga
DBGET
integrated database retrieval system
