Geoalkalibacter subterraneus: GSUB_03005
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Entry
GSUB_03005 CDS
T03585
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb00300
Lysine biosynthesis
gsb00470
D-Amino acid metabolism
gsb01100
Metabolic pathways
gsb01110
Biosynthesis of secondary metabolites
gsb01120
Microbial metabolism in diverse environments
gsb01230
Biosynthesis of amino acids
Module
gsb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GSUB_03005
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSUB_03005
Enzymes [BR:
gsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GSUB_03005
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
AJF05750
UniProt:
A0A0B5FNW8
LinkDB
All DBs
Position
complement(663632..664885)
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AA seq
417 aa
AA seq
DB search
MHYFQYKGNELYAEDIPIADIVAAVGSPVFIYSQATFERHYKAFDEAFGQAPHTICYSVK
ANSNLAILKLIAGLGGGVDIVSGGELFRALEAGVDPKKIVYSGVGKRDDEIEYALRSDIL
MFNVESEQEIDRINEIAGQVGKKAGIALRVNPNVDPQTHPYITTGLKKAKFGITMEDAVA
EYKRAAQMSNLEILGIDCHIGSQLTNVEPFVDSIKKLKELISQLGELGIELKYLDLGGGL
GIQYDAEDPPLPADYGAAIQSETKDLGLHLIFEPGRNIAGNAGILAAKCLFTKERDDKHF
IIIDAGMNDLARPALYGSFHGVQPVVKDQDGMVAADIVGPICETGDFLVKERQVPMFKQG
DLMAFMSAGAYGFTMSSNYNSRPRAAEVLVNGNRFAVIRERETVEDLIRGESVPDWM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcactactttcagtacaagggcaatgaactttatgccgaagacattccgatcgccgac
atcgtcgcggctgtcggcagtccggttttcatttattcgcaggccactttcgagcgtcac
tacaaagcgttcgacgaagccttcggtcaagcgccgcatactatctgctattcggtcaag
gccaactccaacctggcaatcctcaaactgattgccggcctcggcggcggtgtcgacatc
gtctccggcggcgagctttttcgcgccctggaagctggcgtcgatcctaagaaaatcgtc
tattccggcgtcggcaagcgcgacgatgaaatcgaatatgccctgcgcagcgacattctg
atgttcaacgtcgagtcggagcaggagatcgaccgcatcaacgaaatcgccggacaggtg
ggcaaaaaggccggcatcgcgctacgggtcaatcccaacgttgatccccagacccacccc
tatatcaccaccggcctgaaaaaggccaagttcggcatcaccatggaagatgcagttgcc
gaatacaagcgcgccgcgcagatgtccaatcttgaaattctcggcatcgactgccatatc
ggcagccaattgaccaacgtcgagccttttgtcgattctattaaaaagctcaaggaactc
atctcgcagcttggcgagttggggatcgagctgaaatatctggacctcggcggcggcctc
ggcattcagtacgacgctgaagatccgccgctgcctgcagactacggtgccgccatccag
tccgaaaccaaggacctgggcctgcacctgatcttcgagccgggccgcaacatcgccggc
aacgccggcatcctggccgccaagtgccttttcaccaaagagcgcgacgacaagcatttc
atcatcatcgacgccggcatgaacgacctggcccgccccgccctttacggctctttccac
ggcgtacagccggtggttaaggaccaggacggcatggtggccgcggacatcgtcggtccc
atctgtgaaaccggcgatttcctggtcaaggagcgccaggtgcccatgttcaaacagggc
gacctgatggcgttcatgtcagcgggagcctacggcttcaccatgagcagcaattacaac
agccgcccccgtgcggccgaggttctggtcaacggcaaccgcttcgcggtgattcgcgag
cgcgaaaccgtcgaggacctgatccggggcgaatcggtacccgactggatgtga
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