Geoalkalibacter subterraneus: GSUB_04035
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Entry
GSUB_04035 CDS
T03585
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsb02000
]
GSUB_04035
Transporters [BR:
gsb02000
]
Other transporters
Pores ion channels [TC:
1
]
GSUB_04035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
OprF
OmpW
DUF481
Phenol_MetA_deg
BBP2_2
Phage_OMP
DUF748
Motif
Other DBs
NCBI-ProteinID:
AJF07896
UniProt:
A0A0B5FWB6
LinkDB
All DBs
Position
complement(887068..888318)
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AA seq
416 aa
AA seq
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MLSCALAVSLALAGVATASAEQKERAFTLSPMVGGYVYDGAENIKDDIQYSLGIGYNFTK
SWGAEFVAGLTPTDIDEGNGDVDVMHFRMDGLYHFLTDNALVPYLAAGVGLQNKDYEDGS
DDSEALFNWGGGIKYWLTERTALRADVRHLLTGEAVNNMSYSAGLAWQFAEAAKPEPRDS
DGDGVPDERDQCPGTPRGVQVDNKGCPLDSDGDGVPDYRDKCPGTPKGVQVDDKGCPLDS
DGDGVPDHLDQCPDTPKGASVDDKGCALDSDGDGVPDYRDKCPDTPAGELVDEDGCTLKM
TMHINFDLDKTAIKPEYESELARAAAFIQKHRDVPYILVAGHTDSLGSESYNKDLSMRRA
QAVVDYLVSEHGIDRKRLVARGYGEAQPVADNSTAEGRYQNRRVETICCMVLPPEE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
attctgtcctgcgccctggccgtcagcctggccctggctggggttgcaaccgcttcggcc
gagcagaaggagagggcctttaccctttcccccatggtgggcggctacgtttatgacggc
gccgagaacattaaagatgacattcagtacagtcttggtatcggctacaactttaccaag
tcctggggcgctgaatttgtcgccggcctgacccccaccgacattgacgaaggcaacggc
gacgtcgatgtgatgcacttccgcatggatggcctttatcatttcctgacggacaacgcc
ctggtgccctatctggccgccggcgtggggctgcagaataaagactacgaagacggctcc
gacgacagcgaagctctcttcaactggggtggcgggatcaaatactggctgacagaaaga
accgccctgcgcgccgatgtgcggcatctgctgaccggcgaggctgtcaacaacatgagc
tattccgccggccttgcatggcagttcgccgaagcggccaagcccgagccccgcgacagc
gacggcgacggcgtacccgatgagcgcgaccagtgccccggcacccccaggggtgttcag
gtcgacaacaagggctgccctcttgacagtgacggcgacggtgtccccgactatcgcgac
aaatgccccggcacccccaaaggcgtccaggtcgatgacaagggctgcccccttgacagc
gatggcgacggtgtccccgatcatcttgaccagtgccccgacacccccaaaggcgcctct
gttgacgacaagggctgtgccctcgacagcgacggcgacggcgtacccgattatcgcgac
aaatgccccgacaccccggcaggcgaactggtcgatgaggacggctgcaccctcaaaatg
accatgcacatcaacttcgatcttgacaaaacagccattaaacccgagtacgaatcagaa
ctcgcccgtgcggcggccttcatccagaagcaccgcgacgtgccttacatcctggtcgcg
ggtcatacagactctctgggcagtgaatcctacaacaaggatctttccatgcgccgcgcc
caggcagtcgttgactacctggtcagcgaacatggaattgaccgcaagcggctggtcgca
cgtggctacggcgaggcgcaaccggttgccgacaacagcaccgctgaaggacgctatcag
aaccgccgcgtcgaaaccatctgctgcatggtgctgccgcctgaagaataa
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