Geoalkalibacter subterraneus: GSUB_04750
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Entry
GSUB_04750 CDS
T03585
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSUB_04750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_04750
Enzymes [BR:
gsb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GSUB_04750
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSUB_04750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
AJF07912
UniProt:
A0A0B5FI78
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All DBs
Position
1055278..1055847
Genome browser
AA seq
189 aa
AA seq
DB search
MGCRPETLEEIAAELHNCQRCPLSKRRRNVVFGVGDPQAQLVFVGEGPGREEDEKGEPFV
GEAGRLLDRILSAMGLNRDQVYICNVVKCRPPGNRDPLPEEIEHCEPYLKRQLATINPRV
VVALGRFAVQTLLRDSAPISRLRGHWREYEGIALMPTFHPAFLLRKPAMKREVWEDMKQV
LHRLRELRD
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccgccctgagaccctcgaagagatcgctgctgaattgcacaactgccagcgc
tgccctttgagcaagcggcgccggaatgtggtgtttggcgttggagaccctcaggcgcaa
cttgtgtttgtcggggaagggccgggtcgagaagaggatgaaaaaggggagccctttgtc
ggtgaggccggcagactgcttgaccgtattctgtccgccatgggcttaaatcgcgatcag
gtttatatctgcaatgtcgtcaagtgccgcccgccggggaaccgcgacccccttccggaa
gaaatcgagcactgcgagccttatctcaaacgtcaattggctacgatcaacccccgcgtt
gttgttgccctgggccgcttcgccgtacagaccctgctgcgtgattccgcacctatcagc
cggttgcgcggtcattggcgggagtatgagggaattgccctgatgccgacttttcacccc
gcctttctgttgcgaaagccggcgatgaagcgcgaggtctgggaggatatgaaacaggtc
ctgcaccgcttgcgtgaactgcgggactga
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