Geoalkalibacter subterraneus: GSUB_04975
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Entry
GSUB_04975 CDS
T03585
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gsb02044
]
GSUB_04975
02035 Bacterial motility proteins [BR:
gsb02035
]
GSUB_04975
Secretion system [BR:
gsb02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
GSUB_04975
Bacterial motility proteins [BR:
gsb02035
]
Pilus system
Pilus assembly proteins
GSUB_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_7
ResIII
AAA_14
AAA_16
AAA
Pox_A32
DUF2949
DEAD
AAA_29
SLFN-g3_helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AJF06043
UniProt:
A0A0B5FFJ2
LinkDB
All DBs
Position
1119478..1121178
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AA seq
566 aa
AA seq
DB search
MTRNRLGELLVRSQLITDDQLAQAIEDQKKQGGRLGSCLIKLGFIQDDELASFLSKQYGV
PSINLEEFDIDPVILRLIPPDVAQKYQVIPVNRAGATLIVAMSDPSNIFAIDDIKFMTGY
NIEVVVAPDAAIKAAIDQYYDQSATLADVMEGLDDIDLEVVDEDDKFDVRELEKATEDAP
VVKLVNLILTDAIKKKASDIHIEPYETVFRVRYRIDGVLYEVMKPPMKLKNAITSRLKIM
AEMDIAERRLPQDGRIKIKLPGGKDMDFRVNCMPTLFGEKVVLRLLDKGNLQLDMTKLGY
EEKALKWFKKEIHKPFGMVLVTGPTGSGKTVSLYSALSELNKVSDNISTAEDPVEFNFAG
INQVQMHEEIGLNFAAALRAFLRQDPDIIMIGEIRDFETAEIGVKAALTGHMVLSTLHTN
DAPSTINRLLNMGIEPFLVASAVNLITAQRLARRVCPECKEPEDIPKQSLIEAGVPGDEV
DGIVCYRGMGCSHCNKTGYRGRVGLYQVMPMFEEIREMVLAGANTAEIKRESMRLGVKTM
RQSALTKLQEGVVSFEEVLRCTIADD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcaatcgacttggagagcttctggttcgcagccaattgatcaccgacgatcaa
ctggctcaggccatcgaggatcagaaaaaacagggagggcgcctcggctcctgcctgatc
aagctcggttttatccaggatgatgaactggcctccttcctttcgaagcagtacggggtt
ccttcaatcaacctcgaagagtttgatatcgaccccgtcattctgcgcctgatcccgcca
gatgttgcgcagaaataccaggtcattccggtcaaccgtgccggagccaccctgatcgtc
gccatgagcgacccttccaacatcttcgccattgacgatatcaagttcatgaccggctat
aacatcgaagtcgtggtggcgcctgatgccgccatcaaggcggcgatcgatcagtattac
gatcagagcgccaccctggccgatgttatggagggtctcgacgatattgatcttgaggtg
gttgatgaagatgacaagttcgatgtgcgcgagcttgaaaaagcgaccgaagatgcgccc
gtcgtcaagctggtcaatctgatcctcaccgacgccatcaaaaagaaggcctcggatatc
catatcgaaccctacgaaacagtcttccgggtgcgctatcgcattgacggtgtgctgtat
gaagtgatgaagccgcccatgaagctcaaaaacgcgattacctcccgcctcaaaatcatg
gctgagatggatatcgccgagcggcgtctgccccaggacggccgcatcaagatcaagctg
cccggcggcaaggacatggatttccgggtcaactgcatgccgaccctctttggggaaaag
gttgtcctgcgtctgcttgacaagggcaaccttcagctcgacatgactaaattgggctat
gaggagaaggcgcttaaatggttcaagaaagagatccacaaaccgttcggcatggttttg
gtcaccgggccgacgggttccggcaagacggtttctctttattctgcgctgagtgaactc
aacaaggtcagcgataatatctcgaccgccgaggatccggtggaattcaacttcgccggt
atcaaccaggtgcagatgcatgaggagatcggcctcaatttcgccgcggcgctgcgcgcc
ttcctgcgtcaggacccggacatcatcatgatcggtgagattcgcgatttcgagaccgcc
gagatcggggtcaaggccgcgctgaccggtcatatggtgctctcaaccctgcacaccaac
gacgcgccgagcaccatcaaccgtctgctgaatatggggattgaaccattcctggtcgcg
tcggcggttaatctgattaccgcacagcgcctggcgcgacgggtctgccccgagtgcaaa
gagcctgaggatatccccaagcagtcccttatcgaggcgggtgtccccggtgatgaagtc
gacggcatcgtctgctaccggggcatgggatgctcccactgcaacaagaccggctatcgc
ggccgggttggcttgtaccaggtcatgcccatgttcgaggagattcgcgaaatggttctg
gctggggccaataccgctgaaatcaagcgcgaatccatgcggttgggggtcaagaccatg
cggcagtcggcattgaccaagctgcaggaaggggtggtttcttttgaagaggtcctgcgc
tgcaccattgccgatgactga
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