Geoalkalibacter subterraneus: GSUB_05070
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Entry
GSUB_05070 CDS
T03585
Name
(GenBank) hypothetical protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gsb02044
]
GSUB_05070
02035 Bacterial motility proteins [BR:
gsb02035
]
GSUB_05070
Secretion system [BR:
gsb02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
GSUB_05070
Bacterial motility proteins [BR:
gsb02035
]
Pilus system
Pilus assembly proteins
GSUB_05070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
AJF06058
UniProt:
A0A0B5FFK6
LinkDB
All DBs
Position
1136646..1139513
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AA seq
955 aa
AA seq
DB search
MRCAASRLARFGYLIVVCAVFCGFSFPLNVARAEEQPAENSDVNRIVSVTVDADEKNPKV
NIRTENPVGYRYTVYDTTDPARVVIDFPRMDVSDIESPLPVDVGPIQEIRAVSFDLTLGK
LGRIEVLVDRKTDYRVKIDGNDFVMTFAEPSAPVEAPAAPQQVEKTEKTDKTEPVARQDS
VSLRAPAPAPALADAVQVTAVEIRDGRAAILTNGPIDKYRYFNLSTPPRLVLDIFGVKPS
FRERELPGARGFDRVRVGTYDDKTRFVFDAGGSDLPSYEVSPADEGLMVTWTPDERVPMA
EQPSPEPEIEMVESTREPQAAQSRPEPVAAPTEEPEPKSEPVVSSEPEVGENDAPKAEPK
PVSARQVAEVEVNAKPAPVTERMTQAPVQVEDISFAIEGDLSVLTVDLSAPAQVSNPIKR
GNVVLFGLDHATIKRSLRRVIDTSAFPSALEMITPYTVNRGTVQDVRFAARLKGDVPYRL
KQRGDQLIFEVENGEFAKTGEAAAQIELKGAQSSTRVVAAHAPVPAIDSGEKTAPKSLAT
QALFGEESQVSAPSYSGDRISLVFDNADVRNLLQLIAEVSDLNIIASEEVSGNVSIRLID
VPWDQALDVILDIKQLGMIREGNVVRILPKSKIREMEEAVLTAARNKSELEPLVTRVFSV
SYTDLANVAAPLRDVMSERGRLTQDPRNKQIIVKDTPSVMEEIEGLVEILDTPERQVMIE
ARIVEASSDFTRDLGVNWGISSASNLDPGINRESFNAGIGGNFLVNLPTAGDPSTTAGLG
VRFGEILIDNTVIDLRLSALESSGHGKIISRPRVSTLNGQEAVITQGTTIPYQTSGADGP
KTEFVDATLELKVIPVINPDNSIIMEIEASNSTPGQTFTNADLPGINKKEAKTKVLVYDG
DTTVLGGIFVEDDSETESGVPWLMNVPFLGRFFKSTNVEKRRSELLIFITPRILE
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcgctgcgagcagattggcacgtttcggttatctgattgttgtctgtgcggtt
ttctgcggcttttcgttcccgctgaatgtggcgcgagccgaggagcaaccggctgaaaac
agtgacgtcaaccggatcgtttcagtgacggtggatgctgacgaaaagaatcccaaggtc
aatattcgcaccgagaacccggtcggctaccgctatacggtttatgatacgactgacccc
gcccgggtcgtcatcgattttccgcgtatggatgtctccgatatcgaatcgcccctccct
gtagatgtcggtccgatccaggagatccgggcggtctcgtttgatctgactcttgggaag
ctggggcgaatcgaagttctggtggaccgcaagaccgattatcgcgtcaaaatcgacggc
aacgattttgtgatgacttttgccgagccttcggcaccggttgaagccccggcggcaccg
caacaggttgaaaaaaccgaaaagaccgacaaaactgagccggtcgccaggcaggattcc
gtttccctacgtgctcctgcccccgctcctgccttggcagatgctgttcaggtgactgcc
gttgaaatccgcgatgggcgcgccgctattttgaccaacggtcccatcgacaagtatcgt
tatttcaacctcagcaccccgcctcgcctggtgctcgacatttttggcgtcaagccttct
ttccgtgaacgcgagctgccgggggccagaggtttcgaccgtgtccgtgtcggcacctat
gacgacaagacccgctttgtatttgacgcaggaggcagtgacctgccttcctacgaagtt
tcccctgcagatgaggggctcatggtgacctggactcccgatgaaagggtgcccatggcg
gagcagccttctccggagccggaaatcgaaatggtggaatccacccgggagccgcaggcg
gcgcaaagcaggcctgagcctgttgctgctccgacagaggagcctgagcccaagtctgaa
cctgtggtgtcatccgaaccggaggtgggcgaaaatgacgctccgaaagcagagccaaaa
ccggtttccgcgcgtcaggtcgcggaggttgaggttaacgccaaacccgctccggtgacc
gaacgtatgacacaagcgccggtacaggtagaagatatctcttttgccatcgaaggagat
ctttccgtcctgaccgtagatctctccgcccccgcccaggtcagcaatcccatcaagcgc
ggcaatgtcgtcctgttcggccttgatcacgctaccatcaagcggtctctgcgccgcgtg
atcgacacatctgcgttccccagcgcacttgaaatgatcacgccctataccgtcaatcgc
ggaacggtacaggatgtgcgatttgccgcccgtctcaaaggggatgtgccctatcgcctc
aaacagcgtggggatcaacttattttcgaagttgagaacggtgaatttgcgaagacgggc
gaggcggcagctcaaattgaattgaagggggcgcaatcgtccaccagagttgtggccgcc
catgcgcctgtccctgcaattgacagcggggagaagacggcccctaaaagcctcgcaacc
caggctcttttcggggaagaatcacaggtttctgcgccgtcttacagcggcgaccggatc
tccctggtgtttgacaacgctgatgtacgcaatctgctgcagcttatcgccgaggttagc
gatctcaacatcatcgcctctgaagaggtcagcggcaacgtcagtatccggctcatcgac
gttccgtgggaccaggccctcgatgtgattctcgatatcaagcagctcgggatgattcgt
gaaggcaatgtagtgaggatcctgccgaagagcaagatccgcgagatggaagaggcggtg
ctcaccgccgcacgcaacaagagcgaacttgaaccgctggtgacccgggttttcagtgtc
agctacactgaccttgcgaatgtagctgcccccttgcgcgatgtcatgagtgagcggggc
cgattgacccaggatccacgcaacaagcagattatcgtaaaagataccccttcggttatg
gaagagattgaaggtctcgttgagatccttgatactcccgaacgccaagtgatgattgag
gcgcggattgttgaggccagttccgattttacccgtgatcttggagtcaactggggaatc
agcagtgcaagtaacctcgaccctggaatcaaccgtgaatcttttaatgccgggatcggc
ggtaatttccttgtgaatctcccgacggcgggtgatccttcaacaaccgcaggtcttggc
gtacgattcggtgaaattctgatcgataatacggttatcgatttacgcctcagcgccctt
gaatcctcggggcacggcaagattatctcccgcccgcgagtatcaaccctcaatggtcag
gaagcggtgattacccaggggacgacgatcccttaccagacttcaggtgctgatgggccc
aagacagagtttgttgatgccaccctcgaacttaaagtaatccccgtcattaatcctgat
aacagcatcattatggagatcgaggccagcaacagtactccagggcagacctttacaaat
gccgatttgcctgggatcaacaaaaaagaggccaagaccaaggtgctggtttacgacggg
gacaccacggtattgggcgggatctttgttgaagacgacagcgaaaccgaatccggtgtc
ccttggttgatgaatgtgccgtttttaggacgttttttcaaatcgaccaatgtcgaaaag
cgtcgctcggaattgctgatcttcatcaccccgcgtattcttgaatag
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