Geoalkalibacter subterraneus: GSUB_06025
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Entry
GSUB_06025 CDS
T03585
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsb03032
]
GSUB_06025
03036 Chromosome and associated proteins [BR:
gsb03036
]
GSUB_06025
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_06025
DNA replication proteins [BR:
gsb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GSUB_06025
Chromosome and associated proteins [BR:
gsb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GSUB_06025
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GSUB_06025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AJF06201
UniProt:
A0A0B5FRK4
LinkDB
All DBs
Position
1335508..1335780
Genome browser
AA seq
90 aa
AA seq
DB search
MTKADLVNSMAEKAGLTKAEAERALKAFTDTIEDALKAGDKVALVGFGTFSVGERAARTG
QNPQTGEKIEIAAAKVPKFKAGKALKDSIN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaagcggatcttgtaaactcgatggcggaaaaagcaggtttgaccaaggcggaa
gccgagcgggctctgaaagctttcaccgataccatcgaagatgctctcaaggccggcgac
aaggtcgctctggtcggtttcggaaccttcagcgtcggtgagcgcgctgcacgcaccggt
cagaacccccagactggtgagaaaattgagatcgctgccgccaaggtgcccaagttcaag
gccggcaaggctctcaaggattccatcaactaa
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