Geoalkalibacter subterraneus: GSUB_07685
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Entry
GSUB_07685 CDS
T03585
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb00260
Glycine, serine and threonine metabolism
gsb00630
Glyoxylate and dicarboxylate metabolism
gsb00670
One carbon pool by folate
gsb00680
Methane metabolism
gsb01100
Metabolic pathways
gsb01110
Biosynthesis of secondary metabolites
gsb01120
Microbial metabolism in diverse environments
gsb01200
Carbon metabolism
gsb01230
Biosynthesis of amino acids
gsb01240
Biosynthesis of cofactors
gsb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GSUB_07685 (glyA)
09102 Energy metabolism
00680 Methane metabolism
GSUB_07685 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GSUB_07685 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GSUB_07685 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GSUB_07685 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GSUB_07685 (glyA)
Enzymes [BR:
gsb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GSUB_07685 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AJF06448
UniProt:
A0A0B5FGK6
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All DBs
Position
1676299..1677549
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AA seq
416 aa
AA seq
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MSQNLNQFDPEIAQSIQAETRRQEFSLELIASENFVSERVLEAQGSVLTNKYAEGYPGKR
YYGGCEFVDQAEQLAIDRACALFGAEHANVQAHSGSQANMAVYFEVCQPGDTVLGMNLAH
GGHLTHGSPVNFSGKLFNIVPYGVRQDTATIDYDEVASLAREHRPKLIVVGASAYPRIID
FEAFRAIADEVGAMVMVDMAHIAGLVAAGEHPNPVPHAEFVTSTTHKTLRGPRGGMILCR
EEFAKKLNSNIFPGIQGGPLMHAIAAKAVAFKEAQTDEFKAYAAQVVKNAKALADALSER
NFNLVSGGTDNHLMLLDFTGTELTGKVAEATLEQAGITVNKNAVPFDTRSPFVTSGVRIG
TPATTTRGFKEAEMVQIADWIRRALDNIDNEQQLKSIRNEVEDLCRQFPLYAHRLD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaatcttaatcagtttgatcccgagatcgcacagtcgattcaggccgaaacc
agacgccaggagttcagcctggaactgattgcctccgagaactttgtcagtgaacgtgtt
cttgaggctcaaggctcggtcctgaccaataaatatgctgaaggctatcccggcaaacgt
tactatggtggctgcgaattcgtggatcaggctgagcagcttgccatcgatcgtgcctgc
gcgttgtttggtgctgaacatgccaatgtccaggcccactccggctcccaggccaatatg
gcggtttattttgaggtttgccaaccgggcgatacggtccttggtatgaacctcgcccac
ggaggacacctgactcacggttctcctgtcaatttttccggcaaattgttcaacatcgtg
ccctacggggtacgacaggacaccgccaccatcgattatgacgaagtggcctctctggcc
cgcgagcatcgcccgaagttgattgtcgtcggggccagtgcctatccgcgcatcattgat
ttcgaagcctttcgagccattgccgatgaagtcggagcaatggtgatggtggatatggct
cacattgctggcctggtggccgccggggagcatcccaatcccgtcccccatgctgaattc
gtgaccagtacgactcacaagacgctgcgtggacctcgtgggggaatgatcctgtgtcgg
gaagaattcgccaagaagctcaacagcaatattttccctggtattcagggcggtcccctg
atgcacgccattgccgccaaagctgtggccttcaaggaagcccagactgacgaattcaaa
gcctacgcggcacaggtcgtcaaaaacgccaaggctctggcggatgctttgtcggagcgc
aatttcaaccttgtttccggcggcaccgacaatcatctgatgctgcttgactttaccggt
actgaattgaccggcaaggtggcggaagccaccctggagcaggccggaatcacggtaaac
aagaacgccgtgccttttgacacccgttctccctttgtgaccagcggcgtgcggatcgga
acccccgcgaccacgactcgcggtttcaaagaagcggaaatggtccagattgccgattgg
atccggagggccctggataatatcgacaatgagcagcagttaaaatccatccgtaatgaa
gtcgaggacctttgccgacaatttcctctctacgcccaccgactcgactga
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