Geoalkalibacter subterraneus: GSUB_08805
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Entry
GSUB_08805 CDS
T03585
Name
(GenBank) ABC transporter permease
KO
K02034
peptide/nickel transport system permease protein
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GSUB_08805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsb02000
]
GSUB_08805
Transporters [BR:
gsb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GSUB_08805
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AJF06626
UniProt:
A0A0B5FSQ5
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All DBs
Position
complement(1898989..1899825)
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AA seq
278 aa
AA seq
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MAVSGFKTALRDGWFRTGFIVALVLLTIALLGPALTFHDPHDIGFTPLSGPSAQHWLGVN
DGGMDIGAELLYGLRNTLWFGLLGGTAALLLGIFVGLSSAWYGGWYDRFFMRMGDVLLAI
PVVMPLILVAVLLRPSPEVIALLLALFSWPTTAKGLRAQALAVRNRAHVRAAQRMGAGGR
YIITRHLLPELFPLYPTGWVTKIRMAIFMEASLAFLGLFSPERKSLGVMIRDAIEFYYLD
LWWHWLLPPVFCLTLMLMSLTFIAIGLEQTFDPRLKDG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggccgttagcggatttaaaacggcattgagagatggatggttccgaaccggatttata
gtggcgcttgttctgctcacgatcgccctgctcggtcccgccctcacctttcatgatcct
catgatatcgggtttacgccgctgagcgggccgtcggcgcagcactggcttggagtcaat
gacggcggcatggatatcggcgctgaattgctttatggcttgcgcaacaccctctggttc
ggcttgctggggggaacggcggcgctgctgctggggattttcgtcggcctgagcagtgcc
tggtacggtggatggtacgaccgcttttttatgcgcatgggggatgtgctgctcgccatt
ccggtggtgatgcccctgatcctggtggcggttctgctgcgtccttcgccggaggtcatc
gctctgctgctggccttgttcagctggcccaccaccgccaaggggctgcgtgcccaggcg
ctggccgttcgcaaccgcgcccatgtccgagccgcgcaacgcatgggggccggcggacgc
tacatcatcacccggcatctgctgcccgaactcttccccctctatcccactggatgggtg
acgaaaatccgcatggcgatcttcatggaagcctcactggcctttctgggtctgttctcc
cccgagcgcaaatccctcggtgtcatgattcgcgacgccatcgaattctactatctcgac
ctgtggtggcactggctgctgccgccggtgttctgcctgactctgatgctgatgtcgctg
accttcatcgccatcggactggagcagactttcgacccgcgcctgaaggatggatga
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