KEGG   Geoalkalibacter subterraneus: GSUB_09050
Entry
GSUB_09050        CDS       T03585                                 
Name
(GenBank) DNA-binding protein
  KO
K05788  integration host factor subunit beta
Organism
gsb  Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:gsb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsb03032]
    GSUB_09050
   03036 Chromosome and associated proteins [BR:gsb03036]
    GSUB_09050
   03400 DNA repair and recombination proteins [BR:gsb03400]
    GSUB_09050
DNA replication proteins [BR:gsb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GSUB_09050
Chromosome and associated proteins [BR:gsb03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    GSUB_09050
DNA repair and recombination proteins [BR:gsb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      GSUB_09050
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 YtxC
Other DBs
NCBI-ProteinID: AJF06657
UniProt: A0A0B5FEU5
LinkDB
Position
1962636..1962917
AA seq 93 aa
MNKSELVEKLAGKKNLTYKKSEEIVNLIFDSMTEALINCDRIEIRGFGSFVVKDYRDYMG
RNPKTGEVIHVKPKKLPFFKVGKELRERVNKQH
NT seq 282 nt   +upstreamnt  +downstreamnt
atgaacaagtcagaactggtggaaaagttggctggcaaaaaaaacctgacgtacaaaaag
tctgaggagatcgttaacctcatctttgattccatgaccgaagccctgatcaattgcgac
cgtattgaaattcgtgggttcggtagttttgtcgtcaaggattatcgtgattatatgggc
cgcaacccgaaaacaggtgaggtcattcacgtcaaacccaaaaaattgccgtttttcaag
gtcggcaaagaactgcgcgagcgcgtcaacaagcagcattaa

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