Geoalkalibacter subterraneus: GSUB_09050
Help
Entry
GSUB_09050 CDS
T03585
Name
(GenBank) DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsb03032
]
GSUB_09050
03036 Chromosome and associated proteins [BR:
gsb03036
]
GSUB_09050
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_09050
DNA replication proteins [BR:
gsb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GSUB_09050
Chromosome and associated proteins [BR:
gsb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GSUB_09050
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GSUB_09050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
YtxC
Motif
Other DBs
NCBI-ProteinID:
AJF06657
UniProt:
A0A0B5FEU5
LinkDB
All DBs
Position
1962636..1962917
Genome browser
AA seq
93 aa
AA seq
DB search
MNKSELVEKLAGKKNLTYKKSEEIVNLIFDSMTEALINCDRIEIRGFGSFVVKDYRDYMG
RNPKTGEVIHVKPKKLPFFKVGKELRERVNKQH
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcagaactggtggaaaagttggctggcaaaaaaaacctgacgtacaaaaag
tctgaggagatcgttaacctcatctttgattccatgaccgaagccctgatcaattgcgac
cgtattgaaattcgtgggttcggtagttttgtcgtcaaggattatcgtgattatatgggc
cgcaacccgaaaacaggtgaggtcattcacgtcaaacccaaaaaattgccgtttttcaag
gtcggcaaagaactgcgcgagcgcgtcaacaagcagcattaa
DBGET
integrated database retrieval system