Geoalkalibacter subterraneus: GSUB_10160
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Entry
GSUB_10160 CDS
T03585
Name
(GenBank) ATPase AAA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSUB_10160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_10160
Enzymes [BR:
gsb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GSUB_10160
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GSUB_10160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
OB_YrrC
UvrD-helicase
Herpes_Helicase
HHH_5
T2SSE
PIF1
RsgA_GTPase
DUF6079_1st
SLFN-g3_helicase
PMT2_N
TraI_hel_assoc_N
AAA_16
PhoH
Motif
Other DBs
NCBI-ProteinID:
AJF06842
UniProt:
A0A0B5FFB9
LinkDB
All DBs
Position
complement(2195393..2197621)
Genome browser
AA seq
742 aa
AA seq
DB search
MPKRNESNPARLRGRIERVYYAGPKFSAGRLLTPTGEEVQFAGNLFARENQPVVLLGSWA
THPKYGRQFKVDGMEHDLELDPEGLIHYLANHPEIKGIGPAKARLIVESFGDAFEETLLN
DPERIALKARLPLEAARRLRDEWLKNRSVNTVMAWLSAFGLTHHQVTTLVERLGGNCLDI
LKEDPYILIREIRGFGFKKVDKIARKLGTPKDHTPRIRAGLNFCVREALDNGHCWIEYED
LVDQANLLLVMDALDSRVRIESALDALIEEQALACDSHGGRFVVALPEIVRMERELASLF
GQAETPNPHFQSVKKLDALIRRCASTLNEKQLEAVHSALHHSISLISGGAGSGKSYTISV
INTICEESDLEVVLAAPTGKAAKRLEEVSGRSGTTIHRLLGYDGKGFSRSKENPIDADVL
VVDEFSMVDVPLAWHLFEAVDLSRTTVLLVGDHNQLPPVGPGNILRDLIQTRAIPTVILD
KVVRQAGVLKENCTAVLKGEVRKTSEASVSGCRDWYLVDQFTDPMAARSFLLELFQERLD
ALGFDIIKDVQVLTPTHKGPLGTKELNEELQRLIQRKLWNAEVPPVAMGRRAPFLKHDKV
IQTRNNYDLNVMNGAIGYVVDVLANGTLVIDFDGMPVEMEKGSPDLQDLQLAYALTIHKT
QGSEFPCAVVVVHKAHSFMHHRNLLYTGVTRARRTAIVLGDHWGIQNCAKRCQVDDRRTF
LPLFLDAAQHAEADFARVAEAE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaaatgagagtaacccggcgcgactccggggaagaatagagcgcgtttac
tatgccggacccaagttttccgcagggcgactgcttaccccgaccggtgaggaagtccag
ttcgcgggcaatttgttcgcccgggaaaatcagcctgtggtcctgctcgggtcgtgggcc
acccatcccaaatacggccgtcagttcaaggtcgacgggatggagcacgacctcgaactc
gatccggaggggctgatccactatctggccaaccatccggagatcaagggcattggtccg
gccaaggccagattgatcgtcgagagtttcggcgacgcctttgaagaaacccttctgaac
gaccccgagcgcattgcgctcaaggctcgactgcccctggaagcggcccggcggttgcgt
gacgaatggttgaagaaccgtagcgttaacaccgtcatggcctggctgtcggcattcggc
ctgacccatcatcaggtcaccaccctggtcgaaagactcggcggcaactgcctcgatatc
ctgaaggaagacccgtacatcctcattcgggagatccggggattcggcttcaagaaggtc
gacaagatcgcccgcaagctgggtacccccaaggaccatacccctcgcatccgcgctggg
ttgaatttctgcgtccgtgaagccctggacaatggtcactgctggatcgaatacgaggat
ctggtggaccaggccaatttgctgctggtcatggatgccctggatagccgggttcgtatc
gagagcgccctcgacgcgctcatcgaagaacaggcgcttgcctgcgattcccacggcggg
cgtttcgtggtcgctctgcccgagatcgtccgcatggagcgggagctggcctcgttgttc
ggccaagccgaaacacccaacccgcatttccagtccgtcaagaaactcgatgccctgatt
cggcgctgcgcatcaacgctgaacgagaagcagctcgaagcggtgcactcggccctccac
cacagcatcagcctgatttcgggtggagccggttcgggcaagagctacaccatttcggtc
atcaacactatctgcgaggagagcgacctggaggtcgtgctcgccgcgccgaccggcaag
gccgccaagcgcctggaggaagtcagcggccgtagcggcaccaccattcaccgcctgctc
ggctatgacggcaagggtttctcgcgcagcaaggagaatcccatcgatgccgacgtcttg
gtggtcgacgagttttcgatggtggacgtgcccctggcctggcacttgttcgaggcggtc
gacctgtcgcggaccacggtgctgctggtcggggaccacaaccagcttccgccggtggga
ccagggaacatcctgcgcgatctgatccagacacgcgccatccccacggtcatcctcgac
aaggtcgtgcgccaggcgggcgtcctcaaggagaactgcaccgccgttctcaagggcgaa
gtgcgcaagaccagcgaggcgtcggtatctggatgccgggattggtatctggtggatcag
ttcacagatccgatggcggcacgctcgttcctgctggagttgtttcaggagcggctcgac
gccctggggttcgacatcatcaaggacgtgcaggtgctgacgccgacccacaaggggccg
ctcggcaccaaggaactgaacgaggaactgcagcggctcatccagcgcaagctctggaac
gccgaggtaccgccggtcgctatgggccgccgcgctccgtttctcaaacacgacaaggtc
atccagacccggaacaattacgacctgaatgtgatgaacggtgccatcggctatgtggtc
gatgtcctcgcgaacggcaccctggtcatcgacttcgacggcatgcccgtggagatggaa
aagggttcgcccgaccttcaggacctgcagctcgcctatgcgctcaccatccacaaaacc
caggggtccgaattcccctgcgccgtggtggtggtccacaaggcgcattccttcatgcac
caccgtaatctgctctacaccggggtgacccgcgcccggcgcaccgccattgtcctgggc
gaccattggggcatccaaaactgcgccaagcgttgccaggtggatgaccgtcggaccttt
ctgcccctgtttctggacgccgcccagcacgcggaggccgatttcgcccgtgtcgcggag
gccgaatga
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