Geoalkalibacter subterraneus: GSUB_10310
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Entry
GSUB_10310 CDS
T03585
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GSUB_10310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsb03021
]
GSUB_10310
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_10310
Enzymes [BR:
gsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GSUB_10310
Transcription machinery [BR:
gsb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GSUB_10310
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GSUB_10310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AJF06870
UniProt:
A0A0B5FRU2
LinkDB
All DBs
Position
complement(2219484..2219690)
Genome browser
AA seq
68 aa
AA seq
DB search
MARVTVEDCLVQVPNRFLLAMVAAKRAKQLYKGASPLIENKQNNKKIVVALREIAAGKVE
YELPKRKR
NT seq
207 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggttactgttgaagattgtctcgttcaggttccaaaccgttttctgctcgcc
atggttgcggccaagcgcgcaaagcagctttataaaggcgcaagcccccttatcgagaac
aagcagaacaataagaaaattgttgtcgcattgcgtgaaattgcggcaggcaaggttgaa
tacgagcttcccaagcgtaaaagataa
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