Geoalkalibacter subterraneus: GSUB_10385
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Entry
GSUB_10385 CDS
T03585
Name
(GenBank) hypothetical protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb00540
Lipopolysaccharide biosynthesis
gsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GSUB_10385
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gsb01005
]
GSUB_10385
Lipopolysaccharide biosynthesis proteins [BR:
gsb01005
]
Core region
GSUB_10385
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AJF08006
UniProt:
A0A0B5FWK5
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Position
complement(2233315..2234433)
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AA seq
372 aa
AA seq
DB search
MRLAFALFKYFPYGGLQRDCIKIAQECVRRGHQVDIYCMEWSGPQPAKLNVEVLPIEAWP
NYRRYEKFSSLVREYAAEKDYDALVGFNRMPGLDFYFGADPSFALKLKQKPFWYKYLPRS
RSFLDAERGVFGRESKTRIFMLSDMEIPHIQQYYRTPSSRFFLLPPGVEKDRLAPSDYVK
RRIAFRNKLDVKPDQKLLLMVGSGFRIKGLDRALEALARLPSPLREKSLLMILGRDNQKP
FERQAEKLGLAHQVRFMGGRDDVADFLFSADLLVHPAYRESAGMILVEAIAARLPVLVTD
TCGYSFHIKNSGAGRVHSSPFNLQKFSQNMSDMLTLDPSVWQKAADDYLHKTDLFGLAER
AADIIEGKVLTC
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggcttttgccctgttcaaatacttcccctacggggggctgcaacgtgactgc
atcaagattgctcaagagtgtgtgcggcgcggacatcaggtggatatttactgtatggag
tggagcggacctcagcctgcaaaactgaatgtggaagtgttgcctattgaggcctggcct
aactatagacggtatgaaaagttctcttctctggttcgcgaatatgctgcagaaaaagac
tatgatgcgctggttggatttaatcgaatgcccggactggacttttactttggcgctgat
ccgtcttttgcccttaaattaaagcagaagcctttctggtataaatatttgccgcgttca
cgcagttttttagacgcagagcgcggggtatttggtagagagagcaaaacgcgaattttt
atgctaagcgatatggaaattccccatattcagcaatattacaggacgccgagttcacgt
ttttttctgttgccgccgggtgttgaaaaggatcgtctcgccccttcggattatgtgaaa
cgcagaatagccttccggaataaactggacgtaaagcctgatcagaaattacttttgatg
gtcggttctggattccgaattaaaggtcttgatcgtgctctggaggccttggctcgcttg
ccttcccctttgcgtgaaaagagcctgttgatgatcctcggacgggataatcagaagccg
tttgagcgccaggcggaaaaactcggtttggcccatcaggtccgatttatgggaggacgc
gatgacgttgctgactttttgttctctgctgatctactggtacaccctgcttatcgagag
tcggcgggaatgattctggttgaggcaatagccgcccgactccccgttcttgtgacagac
acatgtggctacagttttcatattaagaactcaggcgccggtcgagttcattcatcaccg
ttcaatcttcagaaattcagccagaacatgtccgacatgttgactctagatcccagtgtt
tggcaaaaagccgcggatgactatttgcataaaacggatctgtttggattggctgaacgg
gcggctgatattatcgaaggtaaggtgttgacatgctga
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