Geoalkalibacter subterraneus: GSUB_10425
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Entry
GSUB_10425 CDS
T03585
Name
(GenBank) ABC transporter permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GSUB_10425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsb02000
]
GSUB_10425
Enzymes [BR:
gsb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
GSUB_10425
Transporters [BR:
gsb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GSUB_10425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
MMR_HSR1
AAA
Zeta_toxin
AAA_29
AAA_21
ABC_ATPase
nSTAND1
AAA_15
RsgA_GTPase
AAA_33
AAA_5
DUF4153
AAA_30
Rad17
PRK
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AJF06887
UniProt:
A0A0B5FFG2
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All DBs
Position
complement(2241195..2242931)
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AA seq
578 aa
AA seq
DB search
MDSKALEIYRRLLQYSRPYAWRIAFAVVASVLVAGTDVMFAQLVQPLVDNIIAAKNADIV
YYVPVAILSLAVVKGASRYFQEYMIKTAGQLVIQDVRNDLYSRSVGQSMGFFGRHQTGSL
MSRVLNDVGMMQRSAADVVVDVVRDSFALIGLVALVFYRDVNLALVSFTVLPLVIFPAIY
IGRKVKINTVKGQKQMGGVSSVLQETFAGIKVIKAFGSESRESGRFRDENFRYYRFIRKV
LKYDAATAPIVEIFASIGAAAVFWYGINRVIDGAMTQGELFSFVTAMFMMYGPLKRLTKV
NNTIQKSLGAAERVFEIMDEPVAVKDFPGAQPLEITSGEVVFDHVDFSYDGQEYVLHDFN
LRAAPGEIVALVGPSGAGKSTVVGLLTRFYDPQKGAVRIDGQDICQVTLKSLKKHIALVD
QETFLFNDTIYNNIRYGRWDASEEEVQKAARKAFAEDFILHLPEKYQTHIGDRGVRLSGG
QRQRISIARAILRDAPILLLDEATSALDTESENEVQSALANLMRDRTTFVIAHRLSTIMD
ADKIVVIDNGCVLEVGTHNELLARNGLYTKLYQMQFRE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtggatagtaaagcccttgaaatatatcgcagacttttgcagtattcgaggccctacgcc
tggcggattgcctttgctgtcgtcgcctcggttcttgtggccgggaccgatgtcatgttc
gcacagctcgttcagcctttggtggacaatattattgctgcgaaaaatgccgatattgtt
tactacgttcccgttgccattctctccctggccgttgttaagggggcttcgcgctatttt
caggaatacatgatcaagacggctggacaattggtgattcaggatgtccgaaatgatctg
tactctcggtccgttgggcaatctatgggatttttcgggcgccatcagaccggatccctt
atgtcgcgcgtgcttaatgatgtcggcatgatgcagcgctcggctgcggatgtcgtggtt
gacgtggttcgcgattcattcgcgttaatcggcctggtcgctctggtcttttaccgggat
gtgaatctggcgctggtgtctttcactgttttgcccctcgtcattttccccgccatttat
atcggccgcaaggtcaagataaataccgtcaaggggcagaagcagatgggcggggtctca
agcgtcctgcaggagacctttgccggcattaaggtcatcaaggcttttgggtccgaatca
cgcgaaagtggtcgcttcagggatgaaaatttcagatactaccggtttatccgcaaggtt
ctcaaatatgacgcagcaactgccccgattgttgaaatttttgcgtctatcggggccgcg
gcagtgttctggtacggaatcaatcgtgtgatcgatggggctatgacacaaggcgaactc
ttctcctttgtcaccgccatgttcatgatgtacggtccgctcaagcggctgacgaaggtc
aacaacacgatacaaaaatccctgggagccgccgaacgcgtcttcgaaatcatggatgaa
ccggtggccgtcaaggactttcccggggctcaaccgcttgagattacttcaggtgaagtc
gtattcgaccatgtcgatttttcctatgacggccaagagtatgttttgcatgattttaat
ctgcgtgccgctccaggagaaattgtcgcgttggtggggccaagcggggcaggtaaatcc
acagtcgtcgggcttctgacacgtttctatgacccacagaagggtgctgtgcgcatcgat
ggacaggatatttgccaggtaacgctcaaaagcctgaaaaaacatatcgcattggttgac
caggaaacatttctgttcaatgacacaatttacaataatattcgctacggccgctgggat
gccagcgaggaagaggttcaaaaagccgcacgaaaagccttcgctgaagactttattctt
catctgcccgaaaaatatcagacccatatcggtgatcggggtgttcgtctctccggtgga
cagcggcagcgcatcagcatcgcccgggcgatcttgcgtgatgcacctattcttcttctt
gacgaggcgaccagtgccctggataccgaaagcgagaatgaggttcagagtgcactggcc
aacctgatgcgcgatcgcacaacttttgtaattgcacatcgcctgtcgaccattatggat
gcagacaaaattgtggtcatagacaatggttgtgtgcttgaggtcgggactcataacgaa
cttctggcacgcaacggactctataccaagttgtaccagatgcagttccgggaatag
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