Geoalkalibacter subterraneus: GSUB_10630
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Entry
GSUB_10630 CDS
T03585
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsb03016
]
GSUB_10630
Enzymes [BR:
gsb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GSUB_10630
Transfer RNA biogenesis [BR:
gsb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
GSUB_10630
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Fer4_12
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AJF06918
UniProt:
A0A0B5FHS1
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All DBs
Position
complement(2291388..2292731)
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AA seq
447 aa
AA seq
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MSKFFYLETFGCQMNVVDSEQIVDLLQAGGYRPVEDPENADLILLNTCSVRDKAERKVYG
HLGRFKPLKQRRPDLIIGVGGCVAQQEGERLLQKLPFVDLVFGTHNIHRLPEMVAGAQRR
DRRAETQFLDRETRKNLFPERSTDGNITRFVTIMQGCDNFCSYCIVPHVRGREISRPSAD
ILDEVREMADRGVREVTLLGQNVNSYGANEPGELSFAQLLHEVHEVEGIERIRFTTSHPK
DLSDDLIRCFGELPKLATHLHLPVQCGSDAVLEKMNRGYTREEYLDKVQRLKEACPDIRL
TSDIIVGFPGETEEQFEQTLTLMEKVRFADVFSFLYSRREGTAAADLEESLPPQRKQERF
DRLLTLQQAISTGIWQQDVGQTLPVLVEGESRQKGELFGRTTWNRIVHFEADSSLIGRIV
PVRVIASMKNSQRGELPASVEPMRRTG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtttttctatcttgaaacattcggttgccagatgaacgtggtggattccgag
cagattgtggatctgctgcaggctggagggtaccggcctgtggaagatcctgagaacgcc
gatctgatcctgctcaatacctgttcagtgcgtgacaaggcggaacgtaaggtttacggt
catttgggacgtttcaagcctctcaagcagcgccgacccgacctgatcatcggggtcggc
ggctgtgtcgcccagcaggagggtgagcgtcttctgcagaagctgccctttgtcgacctg
gttttcggaactcacaatatccaccgtctgcctgaaatggtggccggcgcccaacgccgc
gatcgccgggcggaaacgcagtttcttgaccgggagacgcgcaagaacctgttccctgaa
cgttcgaccgatggcaacatcacccggttcgtcaccatcatgcaggggtgcgacaatttc
tgctcctattgcattgtgccccatgtccgcggccgtgaaatcagccgtccttccgcagat
atcctggacgaagtgcgcgaaatggccgatcgtggtgtcagggaggtgactcttctggga
cagaatgtcaattcctacggagccaacgagccgggagagctttcctttgcccaattgctt
cacgaagtccatgaggtcgagggaatcgagcggatccgttttacgacatcgcatccgaaa
gatctctccgatgatctgatccggtgtttcggcgagcttcccaagttggccacccacttg
catttaccggtgcagtgcggctctgatgccgttttggaaaaaatgaaccgtggctacacg
cgcgaagaatatttggataaagtgcagcggctcaaagaagcctgccccgatattcgcctg
acctcggatatcattgtcggctttcccggagaaactgaggagcagttcgaacagaccctg
actctgatggaaaaagtccgttttgccgatgttttctccttcctttattcccggcgcgag
ggaacggccgcggcggatctggaagagtctctgccgccgcaacgcaaacaggagcgcttc
gatcggcttctgacattgcagcaggcgatcagtacagggatctggcaacaggatgtgggg
caaactctgccggtgttggttgaaggcgagagccggcagaagggggaacttttcggccgc
acgacctggaaccggatcgtgcacttcgaagcggactcatcattgatcggacgtattgtg
ccggtgcgtgtgatcgcgtccatgaaaaacagccagcgtggtgaactgccggcctctgtc
gagcccatgagacggaccggctga
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