Geoalkalibacter subterraneus: GSUB_10765
Help
Entry
GSUB_10765 CDS
T03585
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsb03032
]
GSUB_10765
03036 Chromosome and associated proteins [BR:
gsb03036
]
GSUB_10765
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_10765
DNA replication proteins [BR:
gsb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GSUB_10765
Chromosome and associated proteins [BR:
gsb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GSUB_10765
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GSUB_10765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_bac_1
DUF5666
Motif
Other DBs
NCBI-ProteinID:
AJF06940
UniProt:
A0A0B5FS17
LinkDB
All DBs
Position
complement(2320104..2320391)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIEQLSVVNTMLSKKEAELVINTIFDSISDALIDGDRVEIRGFGSFTIRERDARE
ARNPKSGDLVKIPPKKTPFFKTGKELRERVNNGAC
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaagtgagctgattgagcagttgtccgttgtgaataccatgttgagtaaaaaa
gaggcggaactggtcatcaacaccattttcgatagtatcagcgatgctctgatcgacgga
gatcgggtggagatccgggggttcgggtcattcacgattcgtgagcgagatgcacgcgag
gcgagaaatcccaagagcggcgacctggttaaaattccgccgaaaaaaacgcccttcttt
aaaaccggaaaagagctgcgtgaacgcgtcaacaacggtgcctgttga
DBGET
integrated database retrieval system
