Geoalkalibacter subterraneus: GSUB_11995
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Entry
GSUB_11995 CDS
T03585
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb03030
DNA replication
gsb03410
Base excision repair
gsb03420
Nucleotide excision repair
gsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSUB_11995
03410 Base excision repair
GSUB_11995
03420 Nucleotide excision repair
GSUB_11995
03440 Homologous recombination
GSUB_11995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsb03032
]
GSUB_11995
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_11995
Enzymes [BR:
gsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSUB_11995
DNA replication proteins [BR:
gsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GSUB_11995
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GSUB_11995
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSUB_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AJF07141
UniProt:
A0A0B5FU71
LinkDB
All DBs
Position
complement(2574252..2576924)
Genome browser
AA seq
890 aa
AA seq
DB search
MTEQPKRLYLIDGSSYIYRAYFAIRHLSNSKGMATNAVYGFTNMLLKVMREHAPDHLAVV
FDARGPSFRKEIYPEYKANRAAMPEDLVPQIPLIKDLVRAFNLPALEFEGYEADDIIATL
ARKHAAEGMEVTIVSGDKDLMQVISERVRMLDTMKDKVFGLQEVQERFGGSPDKVVEVQA
LAGDSSDNVPGVPGIGEKTAVKLISQFGTVENLLARLDEVKGKMKDKLQEFGEQALLSKR
LVTLRDDLSLGVGYDALATGDPDREALTALFGELEFHKLQQEFFADAGSRDDDYQAVMTE
EALNQLIKRLEEASRISFDTETTSLDAMRADLVGISFAVQAGEAWYIPLGHHYLGAPQQL
DRDRVLERLRPLLEDPNKPKIAQNAKYDLLVLRRAGIRVQGTDFDTMVASYLANPAAKSH
GMDNMAAELLGRRTIPFSEVAGSGRNQISFAEVEVEKAVTYAAEDADVTLQLAQKLAPML
NKSEQEKLFHEVEMPLVAILADMEWQGVRVDPQVLGNLSREMEQKLSALESEIHELAGCT
FNIASPKQTGEVLFEKLGLARGKKTKTGWSTNVEVLQKLAEDHAIAARILEHRGISKLKG
TYTDALPKLIHPETGRIHTSFNQTVTATGRLSSSDPNLQNIPIRTPEGRRIREAFIPDEG
NVLLAADYSQIELRILAHLADEEVLKESFARGEDIHRRTACEIFGVFPEMVSDEQRRQAK
TINFGVLYGMGAFSLAKSLGIDRKQAQGFIDAYFERLPRVAEFLEARREEARSNKYVKTL
LGRRCAIPEIDSKNPNFRSYAERNATNYPIQGSAADIIKLAMIGVFKRLQAQSLKTRMVL
QVHDELVFDVPRAELDEVSALVKHEMENAVELRVPLDVEVGVGANWREAH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagcccaaacgcctctacctgatcgacggttcgagttatatctaccgcgcc
tatttcgccatccgccacctgtccaattccaaggggatggcgaccaatgccgtgtacggt
tttaccaacatgctgctcaaggtgatgcgcgagcatgcgccggatcacctggcggtggtg
tttgacgccagggggccgtccttccgcaaggagatttatcccgaatacaaggccaaccgc
gcggcgatgccggaggacctggtgccgcagattccgctgatcaaggatctggtgcgggct
ttcaacctgccggcgctggagtttgagggctacgaggccgatgatatcatcgctacgctg
gccagaaagcatgccgccgaagggatggaggtgaccatcgtttcgggcgacaaggatctg
atgcaggtcatttccgagcgggtgcgcatgctcgataccatgaaggacaaggtcttcggg
ctgcaggaggtgcaggagcgcttcggcggctccccggacaaggtggtggaagtgcaggcg
ctggccggcgatagctccgacaacgtgccgggggtgcctggaatcggggagaagacggcc
gtcaagcttatctcccagttcggtacggtggagaatctgctggcccgcctcgatgaagtc
aaaggcaagatgaaggacaagctgcaggagttcggtgaacaggcgctgctctccaagcgg
ttggtgacgctgcgcgatgatctttccctgggggtcggatacgatgccctggctaccggt
gatccggatcgtgaagcattgaccgcactgttcggcgagctggaatttcataagctgcag
caggagttttttgccgatgccggctcacgcgatgatgactaccaggcggtgatgactgaa
gaggcgctcaatcagctgataaagcggctggaagaagcttcccgcatcagctttgacacc
gagacgaccagtctcgatgccatgcgtgccgatctggtggggatctcctttgccgtccag
gcgggcgaggcctggtatatccccctggggcatcactacttgggagccccgcagcagctg
gaccgcgaccgggtgctggagcggctgcggccgctattggaggatcccaataaacccaaa
atcgcccagaacgccaagtacgacctgctggtcctgcgccgggccggcatccgggtgcag
ggcaccgatttcgataccatggtggcgagctatctggccaaccctgccgccaagagccac
ggcatggacaatatggccgccgagctgcttgggcgccgcaccatccctttctcagaggtc
gccggcagcgggcgcaatcagatcagcttcgccgaggtcgaggtggaaaaggcggtgacc
tacgcggccgaagatgccgacgtcaccctgcagctggcgcagaagctcgcccccatgctc
aacaagagcgaacaggaaaagctcttccatgaggtggagatgccgctggtggcgatcctc
gccgatatggaatggcagggggtgcgcgtcgatccgcaggtgctgggcaatctctcccgc
gagatggaacagaagctctccgccctggaatctgagattcatgagctggccggctgtacg
ttcaacatcgcctcacccaagcagaccggagaagttctgttcgagaagcttggcctcgcc
cgcggcaaaaagaccaagaccggttggtccaccaatgtcgaggttctgcagaagctggcc
gaggatcacgccatcgccgcgcgcatcctcgaacaccgcggcatctccaagctcaagggc
acttacaccgatgccctgccgaagctgattcatcccgaaacggggcgcatccacaccagt
ttcaaccagacggtgactgccaccggccgtctgtcttcgagtgatcccaacctgcagaac
attccgatccgcacaccggaagggcggcggattcgcgaagccttcatccccgatgagggc
aacgtcctgctggccgccgactactctcagatcgagctgcgcattctggcgcacctggcc
gacgaggaggttctcaaggagagtttcgcacgcggcgaggatatccatcgccgtaccgcc
tgcgagatcttcggcgtctttcccgagatggtcagcgatgaacagcgccgccaggccaag
accatcaactttggcgtgctttacggcatgggcgcgttcagcctggcgaaaagcctcggg
atcgaccgcaagcaggcgcagggctttatcgacgcctattttgagcggctgccgcgtgtg
gcggagtttctcgaggccaggcgcgaggaggcgcgcagcaacaagtacgtcaaaaccctg
ctgggccggcgctgtgccatccccgagatcgacagcaaaaaccccaacttccgcagctat
gccgagcgcaacgccaccaattaccctattcaggggtcggcggccgacatcatcaaactc
gccatgatcggtgtcttcaaacgtctgcaggcccagtccctcaaaacccgcatggtgctg
caggttcatgatgagttggttttcgatgtgccgcgcgcagagttggatgaggtcagtgcg
ctggtcaagcacgaaatggaaaacgcggtagaattgcgggtgccgctggatgtggaggtg
ggagtgggcgccaattggcgcgaagcccattga
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