Geoalkalibacter subterraneus: GSUB_13315
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Entry
GSUB_13315 CDS
T03585
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsb02000
]
GSUB_13315
Transporters [BR:
gsb02000
]
Other transporters
Pores ion channels [TC:
1
]
GSUB_13315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF6532
DUF1202
Motif
Other DBs
NCBI-ProteinID:
AJF07341
UniProt:
A0A0B5FUP7
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All DBs
Position
2844828..2846321
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AA seq
497 aa
AA seq
DB search
MSIKTRLAYFVGLSLLTLLLNGCGGASGLQVEPISLSENPSEQIESLETEVTTARVKELH
ILAPESMAAAKEALDAAQEGLREDKGVETILQKVALGRAHLEKAREQAVLAQTVLAKPLE
ARRKALEAGAVQIGSDYLAAENRLVELARALENERLDWAAKHAPGAARQFSDLELRAIKN
TALGEARRILAQAEKKGAGNMVPASFARARGILQETDDYITNNRYQNDIIEDKARNTLFE
ARRTAILLEYSRRFKEMTPEQIALFVEELLRTPTLRLAGEPELRDRPFEAQAETLARTIT
ELQAGQQAQKSQIEAARQQIASLEGITEQEKAAKELYIWEQKATKEKLERERRFQQIFDE
IQEMFAPEEAEVYKQGNHLVIRLRGIRFPVGKAVIAPNNYPLLGKVRRAIRTFNEPAVTI
EGHTDSTGSDAANASLSQARADAVRQYFIANEILPPDRIIAVGYGSRRPLAPNTTTEGRA
INRRIDVIITPQSQSSL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccataaaaacccgcttagcatattttgtcggcctgagcctgctgacccttctcctt
aatggctgcggcggagcctccggcctccaggttgaacctatctccctgagcgaaaacccc
agcgagcagattgaaagccttgaaaccgaggtgaccaccgcccgcgtcaaagaactccac
atcctggctcccgaatcgatggcagcggcgaaggaggctcttgacgcggcacaggagggt
cttcgcgaagacaagggcgttgagaccatcctgcagaaggtcgccctggggcgcgcccat
ctcgagaaggcccgcgagcaggcggtacttgcccagactgtcctggccaaacccctcgaa
gcccggcgcaaagcgctggaagcgggggcggtacagatcggcagcgattatcttgccgcc
gaaaaccgtctcgtcgaattggcacgggcgctggaaaatgaacgactggactgggccgct
aaacatgcgccgggggccgcccgacaattcagtgatctggaactgcgcgccattaaaaat
acagccctgggcgaagctcggcgcattctggcacaggcagagaaaaaaggcgccggaaac
atggttccggccagtttcgcacgtgctcgcgggatcctgcaggaaaccgacgactatatc
accaacaatcgctaccagaacgacatcattgaggacaaggcccggaacaccctgtttgaa
gcccggcgcacagccattctgctggagtacagccgtcgcttcaaagagatgacgcctgaa
cagatcgcgctctttgtagaagagctgctgcggacgccgacccttcgcctggccggtgaa
cctgaactgcgcgaccgccccttcgaggcacaggccgaaacactggcccggaccatcact
gagctgcaggcaggacagcaggcgcagaaaagccagatcgaggcggccaggcagcagatt
gcatctctggagggaatcaccgaacaggagaaagccgccaaggaactctatatctgggag
cagaaagcgaccaaggaaaagctggaacgcgagcggaggttccagcagattttcgatgaa
attcaggagatgtttgcgccggaggaggcggaggtttacaagcagggcaatcacctggtg
attcgcctgcgtggaatccgtttcccggtggggaaagccgttatcgcacccaacaactac
ccactgctgggcaaggtccgccgcgccatccgcaccttcaacgagccggcggtcaccatt
gaaggacataccgacagcacaggaagcgatgcggccaatgcctctctgtcccaggcacgg
gcagatgccgtccgccaatatttcattgcgaatgaaatcctgccccccgatcgaatcatt
gcagtcggttacggctcacgccgtccgcttgcccccaacaccaccactgaggggcgagcc
atcaaccgccgcatcgatgtaattattaccccgcagtcgcagagttctttatga
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