Geoalkalibacter subterraneus: GSUB_13790
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Entry
GSUB_13790 CDS
T03585
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gsb
Geoalkalibacter subterraneus
Pathway
gsb03420
Nucleotide excision repair
gsb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSUB_13790
03430 Mismatch repair
GSUB_13790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_13790
Enzymes [BR:
gsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSUB_13790
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSUB_13790
MMR (mismatch excision repair)
Other MMR factors
GSUB_13790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJF07422
UniProt:
A0A0B5FGY9
LinkDB
All DBs
Position
complement(2956467..2958704)
Genome browser
AA seq
745 aa
AA seq
DB search
MTDLLTQLNPMQRQAVQHGDGALLLLAGAGSGKTRTLTHRVAWLIREHGVAPWQILAVTF
TNKAAGEMRERIEQLLGGGELPWVSTFHSLCVRILRREISALGYTSDFTIYDDQDQERLL
RDVLKELGVSEKSFKPRAAAAAIDGFKNRGLLPEECDRDDFRGEQLVRIYDLYQKRLRLA
NALDFGDLIMLTVHLLRNEEDILRRWQERFRYVLVDEFQDTNAVQYELTRLLADGSRNLC
VVGDDDQSIYRWRGAEVGNILGFERDYPDTTVIRLEQNYRSTRTILDAAGEVVARNIGRT
GKSLWTDNPEGEKITLEALPDDLEEARFVAREIARLHRAGRPLGEMAVFYRTNAQSRPLE
EALVQERLPYVMIGGIKFFSRMEVKDILAYLRVLVNPADTVSAKRIVNVPARGIGATTVA
RIAQLEDDAGGFLPACRLALERGILGAAANKKVTAFVALMDEFAGKLETAPYPELTAELI
EATGYGPKLREEKTEEARERMHNLEQLLAGMEEHRGRESTLQDFLEQVALVTDLDSYDGR
LDRVTLMTLHAAKGLEFPVVFMTGMEEGLFPHSRAGRGGEELEEERRLCYVGMTRAMEKL
YLTHARRRRVYGDFQFNPPSPFLAEIPLSLLDDQVGVKSSNSPKADRAPKAAAHNLAAVF
AGMPGAEQSSAEDEKESFEEFEKDVRLVPEPDQGPRIGMRVRHVKFGVGTVRRLEGQGDN
QKVTVYFNRVGPKKLLLKFAGLEPA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcttctgacacagctcaaccccatgcagcgccaggccgtgcagcacggcgac
ggagcgcttctgctgctggccggcgccggttccggtaagactcgtaccctgacccatcgc
gtcgcctggctgatccgtgaacacggcgttgcgccctggcagattctggcggtgaccttt
accaacaaggcggccggcgagatgcgcgagcgcatcgaacagctgctgggcggcggcgag
ctgccctgggtgtcgacgtttcattccctctgtgtgcgcattctgcggcgcgaaatatcg
gctctcggctatacctccgattttaccatctacgacgaccaggaccaggagcgcctgctg
cgggatgtgctcaaagaactgggtgtttccgagaagtccttcaagccgcgggccgccgct
gcagcgatcgatgggttcaaaaaccgcggactgctgcccgaggaatgtgaccgggacgat
ttccgcggcgagcagctggtgaggatctacgacctctatcagaagcggctgcggctcgcc
aatgcgctcgacttcggcgacctgatcatgctcaccgtgcatcttctgcgcaacgaagag
gatatcctgcggcgctggcaggagcggtttcgctacgtgctggtggatgagtttcaggat
accaacgcagtgcagtacgagctgacccgtctgctggccgacggcagccgcaacctgtgc
gtggtgggggatgacgatcagtccatctaccgttggcgtggcgccgaggtgggcaatatc
ctcggtttcgagcgggactaccccgataccaccgtgattcggctcgagcagaattatcgt
tccacccgaaccatccttgatgctgccggggaagtggtggcgcgcaatatcgggcgtacc
ggcaagagcctatggaccgacaatccggaaggggagaaaattacccttgaggcgctgccc
gatgacctggaagaggcgcgtttcgttgcgcgcgagatcgcccgcctgcatcgcgccggg
cgtcccctgggcgaaatggccgttttctaccgcaccaatgcccagtcgcgtccgctggag
gaagcgctggtacaggagcgcctgccctacgtcatgatcggcggcatcaaatttttctcc
cgcatggaagtcaaggacatccttgcctatctgcgggtgctggtgaatccggccgatacg
gtttcggccaaacgtatcgtcaatgtgccggcgcgtggcatcggggcgaccaccgtggcg
cgcatcgcccaactcgaagatgacgcgggcggttttctccccgcctgccgcctggccctg
gaacgtggcattctgggcgctgcggcgaataaaaaagtgacggcgttcgtcgctctgatg
gacgaattcgccggtaagctggagacagccccctatccggagttgaccgccgagctgatt
gaggcgaccggctacgggccgaaactgcgtgaagaaaagaccgaagaggcgcgtgagcgc
atgcacaacctcgaacagcttctggccggtatggaggaacaccggggccgtgagagcacc
ttgcaggatttcctcgagcaggtggcattggtgaccgatctcgacagttatgacgggcgc
ctcgaccgggtcaccctcatgacgctgcacgctgccaaggggctcgaattcccggtggtc
ttcatgaccggtatggaagaggggcttttcccccacagccgtgccgggcgcggcggcgag
gagcttgaggaggagcggcggctctgctatgtggggatgacccgcgccatggaaaaactc
taccttacccatgcccggcggcggcgtgtctacggcgattttcagttcaatccacccagc
ccgtttctggcggagatccctctttccctgcttgatgaccaggtcggggttaaaagttcc
aactcgccaaaggccgacagagccccaaaggccgccgctcacaacctggcggcggtgttt
gccggcatgcctggcgcggagcagtcctcagccgaagatgaaaaggagtcgtttgaagaa
tttgaaaaggacgtgcggctggttccggagcctgaccaggggccgcgcatcggcatgcgg
gtgcgccatgtcaaattcggggtcggcaccgttcgccggctggaagggcagggcgacaac
cagaaagtcaccgtttatttcaaccgggtcgggccgaaaaaactcctccttaaattcgcc
gggctggaaccggcctga
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