Geoalkalibacter subterraneus: GSUB_14055
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Entry
GSUB_14055 CDS
T03585
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsb01011
]
GSUB_14055
Enzymes [BR:
gsb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GSUB_14055
Peptidoglycan biosynthesis and degradation proteins [BR:
gsb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GSUB_14055
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GFIT
Motif
Pfam:
SLT_2
Motif
Other DBs
NCBI-ProteinID:
AJF07454
UniProt:
A0A0B5FS25
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All DBs
Position
complement(3018797..3019777)
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AA seq
326 aa
AA seq
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MRHSFFHAMMLSILVALCAPGVAWANDFSSWLQDLRTEARAAGISERTLDSAFAEIEEPL
PRVVELDRKQPEFTQTFSEYLAARVSAERIKRGRLMLKRYPTWLGRVESRFGVQRRFLVA
LWGIETHYGAYTGGFKVIPALATLAYDGRRGDYFRSELLTALRIADEGHVRLENMTGSWA
GAMGQCQFMPSSFARFAVDAEGDGRIDIWHSIPDVLASAANYLARSGWQDDQTWGRQVRL
PEDFDPSLVGLEQRRTMRQWEALGVRRADGSALPWRNLESSLILPDGEQGPAYLVYENFR
VLMKWNRSISFALAVGELSDQIANRR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcggcactcttttttccacgcgatgatgctctcgattcttgtagcgctttgcgcgccg
ggagtcgcatgggcgaacgacttttcaagctggctgcaggacctgcgaacagaggcccgt
gccgcggggatttccgaaaggacccttgattcggcctttgccgaaatagaagagcccctg
ccgcgtgtcgttgagcttgaccgcaagcagcccgaatttactcagacattcagcgaatac
ttggccgctcgggtcagcgcagaacgcatcaaacgagggcgtctgatgttgaagcggtac
ccgacctggctggggcgggtggaatcgcgctttggcgtgcagaggcgttttctggtggcg
ctgtgggggattgaaacccactatggagcctacaccggtggtttcaaggtgattcctgcg
cttgcgacactggcctatgacgggcgtcgcggagactattttcgcagcgagctgctcacc
gccctgcgcatcgccgacgaagggcatgtccgtctggaaaacatgaccggctcctgggcc
ggggccatggggcagtgtcagttcatgccttcatcgttcgcgcgttttgccgtggatgcc
gaaggtgacggtcgtatcgatatctggcacagcatccccgacgtgctggcctcggcggcc
aactacctggcacgttccggttggcaggacgatcagacctgggggcggcaggtgcgcctg
ccggaagacttcgatccgtctctagttggactggaacaacgccggaccatgcgccaatgg
gaggctttgggggtgcgccgcgccgatggctccgcgctgccctggcgcaaccttgagtct
tccctgatccttccggatggcgagcaggggccggcttacttggtgtacgagaatttcagg
gtactgatgaagtggaaccgctcgatttcctttgcattggcggtcggagagctttcggac
caaatcgcgaaccgccgctga
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