Geoalkalibacter subterraneus: GSUB_14510
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Entry
GSUB_14510 CDS
T03585
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_14510
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GSUB_14510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
ChlI
AAA_22
AAA_16
Lon_C
DnaB_C
AAA_14
KdpD
DUF7125
NTPase_1
ATPase_2
GvpD_P-loop
nSTAND3
AAA
AAA_24
NPHP3_N
ABC_tran
HepII_C
Rad51
RecA
SLFN-g3_helicase
MCM
AAA_28
AAA_30
AAA_19
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AJF08071
UniProt:
A0A0B5FWU0
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All DBs
Position
3114011..3115372
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AA seq
453 aa
AA seq
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MKTIFVCQQCGGTSPKWLGRCPDCQAWNTLVEEKTAPARDSRAPTSSSRPQRLPQVAVTK
EDRRRCGIGEFDQVLGGGIVAGSFILIGGDPGIGKSTLLLQAVSRLSEQGSALYVTAEES
ARQVKLRADRLGVSPRDVFLLAETSLEAILERVAELKPAFLVIDSIQTIFTAALDSAPGS
VSQVRECASRLMQVAKGDGIPTFLVGHVTKDGAIAGPRMLEHMVDTVLYFEGDPGHPYRI
LRAVKNRFGSTNEIGVFQMKDRGLAEVSNPSELFLSERPDGAAGSAVVPALEGSRPILVE
LQALVSTTSFGTPRRTTMGFDHNRVSLLVAVLDKKVGLSLPAQDIFLNVAGGVRLDEPAV
DLGVMAALASSHLNRAIPQRTIVFGEVGLAGEVRAVSHPDLRVKEAARLGFNRCILPAGN
LKNLEAPPGLRLMGVKSAEEMLEDIFTPEENEK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
attaaaaccatcttcgtctgccagcagtgcggcggcacaagccccaaatggctgggacgc
tgccccgactgccaggcctggaacaccctggtcgaggaaaagaccgcgcctgcccgtgac
agccgcgcccccacttcaagcagccgtccgcaaagactgccccaggtcgcggtcaccaag
gaagaccggcgccgctgcgggatcggtgaattcgaccaggtgctgggcggcggaatcgtg
gccgggtcattcatcctgatcggcggcgatcccggcatcggcaaatcgacgctgctgctg
caggcggtcagccgcctgtccgaacagggcagcgccctgtatgtgaccgccgaggaatcg
gcgcgccaggtcaaactgagagcggaccggctgggagtctcgccgcgcgatgtttttctg
ctggccgaaacctcccttgaagcgattctcgaacgggttgcggaactcaaacccgctttt
ctggtcatcgactcgatccagaccattttcaccgccgccctggactcggcacccggcagc
gtcagccaggtgcgcgaatgcgccagccgtctgatgcaggtcgccaaaggggacggcatc
ccgacctttctggtcggccacgtgaccaaagacggcgccatcgccggaccccgcatgctg
gagcacatggtcgacacggtgctttacttcgagggcgatccaggtcatccctaccgcatt
ctacgcgcggtcaaaaaccgcttcggctccaccaacgagatcggcgtgtttcagatgaaa
gaccgcggcctggccgaagtttccaatccttcggaactttttctgtcggagcgcccggac
ggcgcggccggcagcgcagtggttccggctctcgaaggaagccgtcctatcctggtcgaa
ctgcaggcgctggtctcgaccacctccttcggcacgccgcgccgcaccaccatgggcttt
gaccataaccgggtttcgctattggtcgccgtgctcgacaaaaaagtcgggctgtctctg
cccgcccaggatatttttctcaatgtcgccggaggcgtgcgcctcgacgaaccggcggtc
gacctcggcgtcatggccgcgctggcttcaagtcatctcaaccgtgccataccacaacgc
accatcgtcttcggcgaagtggggctggcgggcgaagtacgggcggtttcgcaccccgac
ctgcgcgtcaaggaggccgcccgtctcggttttaaccgctgcattctgcccgccggcaat
ctgaaaaacctcgaagcgccgcccggcctgcgcctcatgggcgtcaaaagcgccgaggag
atgctcgaagacattttcaccccggaggaaaacgaaaaatga
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