Geoalkalibacter subterraneus: GSUB_16675
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Entry
GSUB_16675 CDS
T03585
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsb03032
]
GSUB_16675
03036 Chromosome and associated proteins [BR:
gsb03036
]
GSUB_16675
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_16675
DNA replication proteins [BR:
gsb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GSUB_16675
Chromosome and associated proteins [BR:
gsb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GSUB_16675
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GSUB_16675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AJF08141
UniProt:
A0A0B5FX14
LinkDB
All DBs
Position
pGSUB1:complement(57299..57574)
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AA seq
91 aa
AA seq
DB search
MTKEDLIKGISEKAGVTKADAGKTIKAIEMIVLEKLQNDEKALLPGIGTFVVKERKARKG
RNPATGESIDIPAAKYVGFKPLKNIREALND
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaggaagatctgattaaaggtatttccgagaaggccggagtcaccaaggctgac
gccggcaaaacaatcaaggcgatcgagatgattgtccttgaaaaactgcagaacgacgaa
aaggctctcctgccaggcatcgggacctttgtggtcaaagagcgcaaggcacgaaaaggg
cgcaatcccgcaaccggagaaagtatcgatattccggcagcgaaatacgtggggttcaag
cccttgaaaaacattcgcgaagctttaaacgactaa
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