Geochorda subterranea: VLY81_05650
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Entry
VLY81_05650 CDS
T10455
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
gsc Geochorda subterranea
Pathway
gsc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VLY81_05650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsc02000
]
VLY81_05650
Transporters [BR:
gsc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VLY81_05650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
HR1
Motif
Other DBs
NCBI-ProteinID:
WRP15647
LinkDB
All DBs
Position
1208071..1209054
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AA seq
327 aa
AA seq
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MQRRLMVTVLLSLMVLSGFHAVAQAGTITVRLPHCCSVDSHFQAGAVRFAELVEQKTNGR
LRVSIFPGGQLGQETEVIQAVQTGVLEMTFIGHDPLAQFAPMVTLLSLPYLFESHDQAFR
ILEGPVGKEIEKELARRNLVVLGWGNNGARVYTNSRRPIESPADLRGLKIRSPENPINLA
ITRALGGTAVAIPYGEVYTAIQQGTIDGQENAVINIYPAKLQEVQRYMSMTHHLLSFTVL
LVNKPFFDSLDRELQAAVREAAAEAMRFQRQHVETLTDRLVQEMQQQGMQVNWPDLEPFR
AATRRVHEEYVGRLIPRELYEMVLDSL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtcgactgatggtgacggtgctcctatccttgatggtgctatctggcttccac
gcggtcgcccaggccggcaccatcacggtgcgactgccacactgctgctcggtcgacagc
cactttcaggcaggtgccgtgcggtttgcggagctagtcgagcagaagacgaacgggcga
ttgcgcgtcagcatcttcccgggcgggcagttgggccaggagacggaggtcatccaggcc
gtacagacgggcgtgctggagatgaccttcatcggtcacgatcccctcgcccagttcgcc
ccgatggtgaccctgttgagtctgccctatctcttcgagagtcacgaccaggccttccgc
atcctcgaaggccccgtgggcaaggagatcgagaaggagctggcccgcaggaacctcgtc
gtcctgggctgggggaacaacggggcacgggtctacaccaacagtcgccgccccatcgag
agcccggcagacctgaggggcctcaagatccggagccccgagaaccccatcaatcttgcc
attacccgggcgctgggaggcacggcggtggccatcccgtacggagaggtgtacacggcc
atccagcagggtaccatcgacggccaggagaacgcggtcatcaacatctacccggccaag
cttcaggaagtccagcgatacatgtccatgacgcatcatctcctctcgttcacggtgttg
ctcgtcaacaagcccttcttcgactccttggatcgggagctgcaggcggccgtgcgcgag
gccgctgctgaggccatgcggttccagcgtcaacacgtggagacattgaccgacaggctg
gtccaggagatgcagcagcaggggatgcaggtgaactggccggatctcgagccgttccga
gctgccacgcgcagggtgcacgaggagtacgtaggcaggttgatcccgagggagctctac
gagatggtgctggattccctgtga
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