Geochorda subterranea: VLY81_05660
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Entry
VLY81_05660 CDS
T10455
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
gsc Geochorda subterranea
Pathway
gsc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gsc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VLY81_05660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsc02000
]
VLY81_05660
Transporters [BR:
gsc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VLY81_05660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DUF2304
CitMHS
Motif
Other DBs
NCBI-ProteinID:
WRP15649
LinkDB
All DBs
Position
1209605..1210903
Genome browser
AA seq
432 aa
AA seq
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MHKPMSLAILLGTFFALLAAGLPIAFALGLASLAYMILFMPGVSLTIIPQHIFAGADSFT
LTAIPFFVLMGELMNAGGISRRLVDFARTLVGHLRGGLGLVSLVASMIFASFSGSAIANA
VATGSVTIPSMIRAGYPRALAAAIEGSASSLGAVIPPSIPMIVYGTLAGVSVGGLFAGGY
VPALLMGLGLAVVIRAKAKRLGIQVQARASWGEILQALRESALALLTPVIVMGGILGGVM
TPTEAGAVGALYTLLMALLAYRELSWRDLPRILLNTALHTGVAMLVMTVATAFSWIMAYE
MIPNRVASAVLSSIQQPWLLMIAIVALLLVIGTFLDTISALVILTPVLVPVATRVGIDPL
FFGIIVTIALTLAVLTPPVGVVLFVTSSTAGTTLEKTSREVLLFLAVLVAGTLLCAVWPD
LVMWLPRLLGFR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaagcccatgtcgctggccattctcctcgggacattcttcgctctgctcgcggcg
gggctccccatcgccttcgccctcgggctggcctcactggcgtacatgatcctcttcatg
ccgggcgtgtcgctgaccatcataccccagcacatcttcgcgggcgcagactccttcacg
ctgaccgcgatcccgttcttcgtactcatgggcgaactcatgaacgccggcggcatctcc
cgccgactcgtcgacttcgcgcgcaccctcgtcggccacttgagggggggccttggcctc
gtctccctcgtcgccagcatgatcttcgccagcttctcggggtcggccatcgccaacgcg
gtcgccaccgggtccgtcacgatccccagcatgatacgcgccggctatccgcgggccctg
gcggcggcgatcgagggctcggccagcagcctcggcgccgtcatcccgcccagcatcccc
atgatcgtctacggcaccctcgcgggtgtctcggtgggcgggctgtttgccggtggctac
gtgcccgcgctgctcatggggcttggactggccgtggtcatccgggccaaggccaaacgg
cttggcatccaggtgcaggcccgtgcttcatggggggagatactccaggcgctgcgggag
tccgcgctcgccctgctgacgccggtcatcgtcatggggggaatcctcggcggggtcatg
acacctaccgaggccggagcggtcggagccctgtacactctgctgatggcgttgcttgcc
tacagggagctctcgtggcgcgatctgccgaggatactgctcaacacagccctccacaca
ggggtcgccatgctggtgatgacggtggcgaccgccttcagctggatcatggcctacgag
atgatacccaaccgtgtggccagcgcggtcctatccagcattcaacagccgtggttgctc
atgatcgccatcgtcgcgctcttgctggtcatcggcaccttccttgacaccatctcggcg
ctggtgatcctcacaccggtcctggtgcccgtcgcgacgcgggtcggcatcgatcctctc
ttcttcggcatcatcgttaccatcgctctgacactcgcggtgctgaccccgcccgtcggc
gtggtgctgttcgtgacatccagtacagcgggcaccaccctggagaagaccagcagggag
gtgctgctgttcttagccgtcctggtcgccggtaccttgctgtgtgcggtgtggcccgac
ctggtgatgtggctgccgagactgttgggcttccgctga
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