Geochorda subterranea: VLY81_06675
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Entry
VLY81_06675 CDS
T10455
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
Organism
gsc Geochorda subterranea
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Herpes_UL56
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WRP15832
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Position
1425831..1427972
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AA seq
713 aa
AA seq
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MLAPTSPLVIQRRIAWLLVGTALGALVLAGRLFYLQVVRHGELSRLALEQRLRPLPVDPR
RGTIVDRNGNKLAISVSADAVYAIPSEVEDPAATAQALAGVLGMPADEIEERLRSRQAAV
WIARRLDTETARRVRALRLPGIGLVERPQRVYPNGSLAAQVLGITGIDNQGLEGLEFYYE
AHLRGVPGRVEAERDAAGREIPGGISRYVPAQDGHELVLTIDQVIQYRAERELERVVRET
QAELGIFIGIDPQTGEILAMAQYPTFDPNRYADYPPELRRNRAIADQFEPGSTFKIVTGA
AALEAGVVRPDERFFDPGFVAIGGGRVSCWLPGGHGSQTFVEATENSCNPVFAIIGAQRL
GPETFYRFARAFGFGQPLGLDFPGEASGFLPAPGTIQHGELLRWANIGFGQGVAVTPLQL
AMAAATIANGGVLMKPHLVKEIRTADGEVLERVRPVALRRVLSPGTAAEFARILRSVVVN
GSGTRAEIPGYRVAGKTGTAQVPNPGGGYGDDAMASFVGFAPVDGARLVGLVMIYKLGVQ
PRWGGLWAAPVFRAIMGDALSYLRVPRREETPPQPGTGEDGRPLALVPNVLFMEAAQAAA
RLEQASLSVSVEGSGTLVADQIPRGGAQVPQGTRVRLVLDQELPRPSAPEVEVPSVLGKS
LAEAAAILAGRGLLLNVEGSGFAVFQSPAPGERVPAGSAVEVRFALQRDGGRP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ttgctggcccccacctcgcccctcgtcattcagcgacggatcgcctggctgctggtgggt
accgccctgggcgccctggtgctggcagggcgcctcttctacctgcaggtggtgcgccac
ggggagctgagccggctcgccctggagcagcggctgcggccgctgccggtggacccgcga
cgcggcaccatcgtggatcgaaacggcaacaagctggccatcagcgtcagcgccgacgcg
gtctacgccatccccagcgaggtcgaggaccctgccgccaccgcccaggcactggccggg
gtgctggggatgccggccgacgagatcgaggagcgcctgcgcagccgccaggcggcggtc
tggatcgcgcgccgcctggacaccgagacggcccggcgggtgcgggcgctgcgcctgccc
ggcatcgggctggtcgagcgtccgcagcgggtctaccccaacggttcgctggcggcccag
gtgctgggcatcaccggtatcgacaaccaggggctcgaggggctcgagttctactacgag
gcgcacctgcggggggtgcccgggcgggtcgaggcggagcgggacgcggcgggccgggag
atcccgggcggcatcagccgctacgtgcccgcccaggacgggcacgagctggtgctgacc
atcgaccaggtgatccagtaccgggccgagcgggagctggagcgggtggtccgggagacc
caggcggagctgggcatcttcatcggcatcgacccgcagacgggcgagatcctggccatg
gcccagtatcccaccttcgaccccaaccgctacgccgactacccgcccgagctccggcgc
aaccgggccatcgccgaccagttcgagccgggctccaccttcaagatcgtgacgggcgcc
gccgccctggaggcgggcgtcgtgcgacccgacgagcgcttcttcgacccgggcttcgtg
gccatcgggggcgggcgggtgagctgctggctgcctggcggccacggcagccagaccttc
gtcgaggccaccgagaactcgtgcaaccccgtcttcgccatcatcggggcccagcggctg
ggccccgagaccttctatcgcttcgcccgggccttcggcttcggtcagccgctggggctc
gacttccccggcgaggccagcggcttcctgccggcaccgggcaccatccagcacggcgag
ctgttgcgctgggccaacatcggcttcggccagggcgtggccgtcacgccgctgcagctg
gccatggccgctgccaccatcgccaacggcggcgtgctgatgaagccgcacctggtcaag
gagatccgcaccgccgacggcgaggtgctggagcgggtacgccccgtggccctgcgtcgg
gtgctctcgccggggacggcggccgagttcgctcggatcctgcgaagtgtggtggtgaac
gggtcgggcacccgggcggagatccccggctaccgggtcgcgggcaagaccggcacggcg
caggtgcccaatccgggtgggggctacggtgacgacgcgatggcgtcgttcgtcggcttc
gccccggtggacggcgcgcgcctggtggggctcgtcatgatctacaagctcggcgtgcag
ccccggtggggcggactgtgggcggccccggtcttccgggctatcatgggagatgccctg
agctacctgcgggtgccccgccgcgaggagacgccaccgcagccgggcacgggcgaggac
ggccggccgctggcgctggtgcccaacgtgctcttcatggaggcggcgcaggccgcggcg
aggctggagcaggccagcctgagcgtgagcgtcgagggcagcggcacgctggtggccgac
cagatcccccggggcggggcccaggtgccgcagggcacccgggtgcgcctggtgctggac
caggagctgccccgaccgtcggcgcccgaggtggaggtgccgtcggtgctgggcaagagc
ctggccgaggcggccgcgatcctggccgggcgcggcctgttgctcaacgtggaggggtcg
ggcttcgcggtcttccagtcgccggcgccgggcgagcgggtgccggccgggtcggcggtg
gaggtgcgcttcgccttgcagcgggatggaggacggccatga
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